Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2264 ATGAATCCCCACATTTCAAAATCCAAACTTTCTCCTCCATCATCACTATCCGAAGcatcatcaagttccaccagtAGGGATGACACTCCCTTTTCTTCCAATCGATTTTCCcacatacccatttccaaatcTCCCTcctaccatcatcatcatcatccattgGCGATTCTCTCTGGCCATATTGGCTCTGTTTCTTGCTTATCCCTCTGTGGCGAGTTCGTCCTCAGTGCCTCTCATGGCAAAGACATCATCGTATGGCAACATCCAGATTTGAGGCCTTTCACCAAGTTCGGACAAGGAGATGGATCGGTGAAATCAGTAGTAACGGTCGGAAACAAGGTTTTCACGGCCCATCAAGATGGGAAAATCAGGGTTTGGAAGGTttctagaagaagaagaaggagttcagaggatgatgatgatgatgtgttcAAGCTTGTGGACACTCTTCCGACAACTATGGATTATTTGGGGAAATTCATGAAACAGAGTAATTATGTCCAAACGAGGAGGCACCACAAGAGGTTGTGGATTGAGCATTCGGATAGCATCTCTTGCTTGGCGGTTTCTAATGGGTTGATCTATTCTGGGTCATGGGATAAGACACTTAAGGTATGGAAGATGACGAACTTCAAGTGTTTGGAATCCATTAAAGCTCATGAAGATGCCATTAATGGGTTGGTTGCGTGTAAAGGGGTTGTGTATTCTGCTTCTGCGGATGGAAAGATCAAAGCCTGGGGGAGAAAAGaggggaagatgaagaagatgacaCATTTCTTAAAAGGGGTTCTAGAGGGTCATAAAGATTTGTCCTTTAATTGTGTTGTTGTTTCTCAAGATGGAAAATGGGTATATGGAGGAGGGTCCAATGGGGTTGTGATGGGATGGGAGAAAACTGAAAAGACTCTGGACGAGTCGTCAAGTGACTTGATCAAAccgttcaatgaccggtccgatttgAAAAACGAAAATTGGAGGCTTGTTTTTGAGATGAAGGCACATGGGATGGCTGTTTTGTGTATGTGTCTAATGAGAGAGATTTTATTCAGTGGATCGTCAGATAAAAgtattgggatttggaagaggGAGGGGTATGGTGGGAAGCTTTGTAAAATTGGGGTTATTAATGGGCATGAAGGGCCAGTGAAGTGTTTGGAGGCAACATATAGTAGTAGGAATGGTGGTGGGTTTATGCTTTATAGTGGAAGTCTTGATAAAAGCTTGAGGGTTTGGTGGGTTCCAAAGTATAATGAGGAGGAAATAGAAGAAAATTCTACTACATCACTACACCAAGAATAG 1299 0.3703 MNPHISKSKLSPPSSLSEASSSSTSRDDTPFSSNRFSHIPISKSPSYHHHHHPLAILSGHIGSVSCLSLCGEFVLSASHGKDIIVWQHPDLRPFTKFGQGDGSVKSVVTVGNKVFTAHQDGKIRVWKVSRRRRRSSEDDDDDVFKLVDTLPTTMDYLGKFMKQSNYVQTRRHHKRLWIEHSDSISCLAVSNGLIYSGSWDKTLKVWKMTNFKCLESIKAHEDAINGLVACKGVVYSASADGKIKAWGRKEGKMKKMTHFLKGVLEGHKDLSFNCVVVSQDGKWVYGGGSNGVVMGWEKTEKTLDESSSDLIKPFNDRSDLKNENWRLVFEMKAHGMAVLCMCLMREILFSGSSDKSIGIWKREGYGGKLCKIGVINGHEGPVKCLEATYSSRNGGGFMLYSGSLDKSLRVWWVPKYNEEEIEENSTTSLHQE 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2264 432 PANTHER OS01G0946100 PROTEIN 13 427 - -
Sto4g2264 432 MobiDBLite consensus disorder prediction 1 35 - -
Sto4g2264 432 PRINTS G protein beta WD-40 repeat signature 114 128 IPR020472 -
Sto4g2264 432 PRINTS G protein beta WD-40 repeat signature 194 208 IPR020472 -
Sto4g2264 432 PRINTS G protein beta WD-40 repeat signature 399 413 IPR020472 -
Sto4g2264 432 ProSiteProfiles Trp-Asp (WD) repeats profile. 375 411 IPR001680 GO:0005515
Sto4g2264 432 Gene3D - 7 157 IPR015943 GO:0005515
Sto4g2264 432 Gene3D - 162 432 IPR015943 GO:0005515
Sto4g2264 432 ProSiteProfiles Trp-Asp (WD) repeats profile. 177 216 IPR001680 GO:0005515
Sto4g2264 432 PANTHER F-BOX AND WD40 DOMAIN PROTEIN 13 427 IPR045182 -
Sto4g2264 432 Pfam WD domain, G-beta repeat 53 86 IPR001680 GO:0005515
Sto4g2264 432 Pfam WD domain, G-beta repeat 372 411 IPR001680 GO:0005515
Sto4g2264 432 Pfam WD domain, G-beta repeat 178 207 IPR001680 GO:0005515
Sto4g2264 432 Pfam WD domain, G-beta repeat 262 296 IPR001680 GO:0005515
Sto4g2264 432 SUPERFAMILY WD40 repeat-like 50 416 IPR036322 GO:0005515
Sto4g2264 432 SMART WD40_4 210 247 IPR001680 GO:0005515
Sto4g2264 432 SMART WD40_4 257 297 IPR001680 GO:0005515
Sto4g2264 432 SMART WD40_4 324 361 IPR001680 GO:0005515
Sto4g2264 432 SMART WD40_4 50 87 IPR001680 GO:0005515
Sto4g2264 432 SMART WD40_4 170 207 IPR001680 GO:0005515
Sto4g2264 432 SMART WD40_4 368 412 IPR001680 GO:0005515
Sto4g2264 432 SMART WD40_4 90 127 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2264 Sto-Chr4 24070282 24071580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2264 167 414 Miscellaneous Gene Families AT5G08390 20.962 1.96e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2264 - - gmx:100775295 530.406