Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2219 ATGTTTGTAGAAACTGTGGAAGCCCATTTTCGCCTCAACATTGACcctaaatataatgatcaaCAATTAAGAGCAACAGTAAATTTGCCCAAGGGAACAGGAAAGCCTGTCAAGGTGGCTGTTCTTACTCAAGgtgaaaagTTCGATGAAGCAAAAAATGCAGGAGCTGATTTGGTGGGTGGAGAGGACCTGATAGAGCAGATTAAAAGAGGATTCATGGAATTTGACAAGTTAATTGCTTCTCCAGATATGATGCCTAAGGTAGCTAGCCTAGGGAAAATCCTGGGGCCAAGGGGACTGATGCCTAATCCTAAAGCTGGTACTGTAACTGCCAATATTCCTCAGGCTATAGCAGAATTCAAGCAGGGAAAGGTTGAATACAGGGCAGATAAAACTGGAATAGTGCACTTGCCTTTTGGAAAAGCTGACTTTTCTGAGGAGGACCTTCTTGTAAACTTGATTGCTGCAATAAAATCAGTAGAAGCAAATAAACCACCTGGCGCTAAAGGTGTGTACTGGAAAAGTGCACACATATGCTCAGCAATGGGACCTTCTATTAGATCTTGCCAAATGTCTGAATCTGATTGGTCAAAGATGGTAGGGAAAGCTACATACAGCACAGCTGCACAGGGATGGACATATAGATAA 648 0.4136 MFVETVEAHFRLNIDPKYNDQQLRATVNLPKGTGKPVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKRGFMEFDKLIASPDMMPKVASLGKILGPRGLMPNPKAGTVTANIPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEEDLLVNLIAAIKSVEANKPPGAKGVYWKSAHICSAMGPSIRSCQMSESDWSKMVGKATYSTAAQGWTYR 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2219 215 SUPERFAMILY Ribosomal protein L1 2 187 IPR023674 -
Sto4g2219 215 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 2 189 - -
Sto4g2219 215 PIRSF RPL1p_RPL1a_RPL10e_RPL1o 1 187 IPR002143 GO:0003723|GO:0003735|GO:0006412|GO:0015934
Sto4g2219 215 PANTHER MITOCHONDRIAL RIBOSOMAL PROTEIN, LARGE 2 189 - -
Sto4g2219 215 TIGRFAM rplA_bact: ribosomal protein uL1 2 187 IPR005878 GO:0003723|GO:0003735|GO:0006412|GO:0015934
Sto4g2219 215 Pfam Ribosomal protein L1p/L10e family 2 184 IPR028364 -
Sto4g2219 215 Gene3D - 32 123 IPR016095 -
Sto4g2219 215 CDD Ribosomal_L1 2 187 IPR028364 -
Sto4g2219 215 ProSitePatterns Ribosomal protein L1 signature. 85 103 IPR023673 -
Sto4g2219 215 Gene3D - 2 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2219 Sto-Chr4 23640076 23643174 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2219 K02863 - gmx:100808549 362.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g2219 4 23640076 23643174 Sto4g2219 4 23640076 23643174 ECH