Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g1411 ATGGGAGTTTTTAGCTTTGAAACAAATGGAAATTCTGCTTTTGCTTTGCAATGTCATGGAAGTTCATTTTCTTCACAAGGAGTTTCGATTTCTTGGAGACCCTTTTTTGGTATATCTTTGAATGCGAGAAATGCAAGGAAAATTCAGCTTTCACATGCTCAAAAGCTCAATTACCGGCCAGTTAGTGCTTCACCGAAGAGTGGCGCTAATGCTGGGTTGATTAGTAATAGTCTTCTTTCGAATGAATTGGAGTTTAAGCCATCCTTCGATGATTATTTGAAGGAAATGGAGTCTGTGAGAACTGTTAGGGTGAAGGAAATAGAGCCTTCCAGAAATGTTAGGGACAAGAAGCATACCAGTAGAGCTAAGAAACAGAAGATGATGGAAAAGGGTATGTCGAGGAAACCAAGGGTGGAAGGAGATGCAGGAAGTGGAAAATTTGTGAAGCTTGGAGGGCGCATGGATAAAACAAATGGGGCATtaaaagttgttgaaaaaatcaTGGGCAAGGAAGGCTCCTCCGTAGCTAGTGGTAAACTCAGAGGAAGAGGTGCTAAAAGGTTTAAACATGAGTATGATGGGAAACAAAGGAAATCTGATGTTAGTGTAAAGTTGAAGCAGGGGGCAGAGATAATGAAAGATACATGGTTGAAACACCAAAATAATAGATCAATACCAAAATCTGATGGCTGCAGTTTGAAAAGTGGACGTGGAAGGATAGCCAGTAGCAACGGTTGGTCTAATTGGAAAATTAACCAGAGAAACATTATAGATGAGGAAGTAAGTCATGGATTGCATTCTTTTAAGACAGTGGAATACAATGATCTTACTACCAGCCAAAAGGACTTTAACTCAAAAGAGAAAATGCCTATGGTAGATAAAATTGTTGTTAGCAAGAATGTCATGCGCAAAGAAGGACTTGAGAGAGGCTACAGGAAAAAAGAGAATGCGGTGATAGAAAATGGACAGAAAAATGTCAAACTGAATGGAAGCAGTAAGCGTTTTGTTGATAGAGGTCATTATGATTATGAAAACTTGGAAGTGGAACGAGCAGCATTTAAGACTTTTGAGGAGTTCAATGATGTTATAAACAAGCCCCAAGTTTCACACAAGGAAATGGAGGATAGAATAGAAAGGCTAGCAAAAGCGTATGTAGCTGTTCCCCTTTTCTCTGCTTCTGGAATTCTTATAAATGGAAAATATAATTTCCTAAGAAGGTTGAATGGTGGAGATATCAATATGCCTGAATGGATCTTTTCTAAGATGATCAAAAGTGCaaagataaaatttaatgaCTATTCTATAGTGAGGGTTATTCAAAGGTTGGGGAAACTAGGAAATTGGCAGCGGGTGATACAGGTCATTGAATGGCTTCAAAGGCGTGAACGTTTCAAATCCCATAAGCTAAGGCATGTATACACTTCTGCTCTTGATGCAGTAGGAAAGGCAAGGAGACCTGTTGAAGCACTAAATATATTTCTTGCAATGCAGcaaCAAATGTCCACATACCCTGATTTAGTAGCTTATCATAGTATTGCTGTCACTCTTGGACAAGCAGGGCACATGAAGGAACTCTTTGACGTAATTGATATCATGCAATCGCCACCTAAGAGGAAGTTCAAAACTGGGGCTCTTGAGAACTGGGACCCAAGGCTGGAACCAGATATCATAGTGTATAATGCGGTCCTCAATGCTTGCGTTCAGCAGAAGCAGTGGGAGGGCGCCTTTTGGGTTTTACAGCAGTTAAAGAAGCAAGGCCAAGAACCTTCTGTTACAACTTATGGCCTTGTCATGGAGGTAATGTTTTCAAGTGGCAAGTACAACTTGGTTCATGATTTTTTCAGGAAAGTTCAGAAGTCTTCTATTCCCAATTCGTTAACATATAAAGTTCTTGTGAATACACTATGGAAAGAGGGTAAAACTGATAAGGCAATATCGGCTGTACAAGAGATGGAAAGACGTGGAATTGTAGGTTCTGCTTCTCTTTATTATGACCTTGCTCGATGTCTTTGTGCGGCTGGAAGATGTAGTGAGGCACTGATGCAGATAGAGAAGATTTGTAAGGTCGCAAACAAGCCACTAGTAGTGACCTACACTGGTTTAATTCAAGCATGTCTGGAATCTGGAAACATCCTAGATGGGGCATACATTTTTGAGAAAATGAGGGATGTTTGCTCTCCAAATCTTGTGACCTGTAACATGATGCTGAAAGCTTACCTGGAACATGGCATGTTTCAAGAAGCAAAAGAATTGTTTGAGAAGATGTTAGAAAATGCAAATCATGTTAGGAGAAATTCTGATTACAAAGATTGGGTTATACCAGATATTTACACATTCAACACCATGTTAGATGTATGTGTTGCAGAGAAAAGATGGGATTATTTTGGTTGCGTCTATCAAAAGATGCTATACCATGGTTACCACTTCAATCCAAAACGTCATCTTCGAATGATACTGGAGGCATCGAGAGCTGGAATGGAAAGCCCTATTGAAATAACGTGGAAGCACTTGGCTGATACAGATCGTATTCCGCCAGCTCCTTTAGTCAAAGAAAGGTTCTGTATGAAGCTTGAAAAAGATGACCATATTGCAGCTCTTGCATGTATCACCAACAACCCATCTCTGGATTTACAGGCGTTTTCCAAGCTGTCATGGTTGAATCTATTCAGAGAAAATGCTCAGCGTTTTCAGAAGGATTCCATCGTTAGGTTAATGAATGAGGTTAACATCCTAGTTTCCAAGAGTAGCTTGCCTCCTCCAGCACTTGAAGCACTGGAGAACCTAATGCAATCTTGGAGAGAATTTTGTTCCCGACCTTTTTTGTAA 2826 0.397 MGVFSFETNGNSAFALQCHGSSFSSQGVSISWRPFFGISLNARNARKIQLSHAQKLNYRPVSASPKSGANAGLISNSLLSNELEFKPSFDDYLKEMESVRTVRVKEIEPSRNVRDKKHTSRAKKQKMMEKGMSRKPRVEGDAGSGKFVKLGGRMDKTNGALKVVEKIMGKEGSSVASGKLRGRGAKRFKHEYDGKQRKSDVSVKLKQGAEIMKDTWLKHQNNRSIPKSDGCSLKSGRGRIASSNGWSNWKINQRNIIDEEVSHGLHSFKTVEYNDLTTSQKDFNSKEKMPMVDKIVVSKNVMRKEGLERGYRKKENAVIENGQKNVKLNGSSKRFVDRGHYDYENLEVERAAFKTFEEFNDVINKPQVSHKEMEDRIERLAKAYVAVPLFSASGILINGKYNFLRRLNGGDINMPEWIFSKMIKSAKIKFNDYSIVRVIQRLGKLGNWQRVIQVIEWLQRRERFKSHKLRHVYTSALDAVGKARRPVEALNIFLAMQQQMSTYPDLVAYHSIAVTLGQAGHMKELFDVIDIMQSPPKRKFKTGALENWDPRLEPDIIVYNAVLNACVQQKQWEGAFWVLQQLKKQGQEPSVTTYGLVMEVMFSSGKYNLVHDFFRKVQKSSIPNSLTYKVLVNTLWKEGKTDKAISAVQEMERRGIVGSASLYYDLARCLCAAGRCSEALMQIEKICKVANKPLVVTYTGLIQACLESGNILDGAYIFEKMRDVCSPNLVTCNMMLKAYLEHGMFQEAKELFEKMLENANHVRRNSDYKDWVIPDIYTFNTMLDVCVAEKRWDYFGCVYQKMLYHGYHFNPKRHLRMILEASRAGMESPIEITWKHLADTDRIPPAPLVKERFCMKLEKDDHIAALACITNNPSLDLQAFSKLSWLNLFRENAQRFQKDSIVRLMNEVNILVSKSSLPPPALEALENLMQSWREFCSRPFL 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g1411 941 MobiDBLite consensus disorder prediction 108 151 - -
Sto4g1411 941 TIGRFAM PPR: pentatricopeptide repeat domain 557 590 IPR002885 -
Sto4g1411 941 TIGRFAM PPR: pentatricopeptide repeat domain 696 723 IPR002885 -
Sto4g1411 941 TIGRFAM PPR: pentatricopeptide repeat domain 730 758 IPR002885 -
Sto4g1411 941 TIGRFAM PPR: pentatricopeptide repeat domain 627 658 IPR002885 -
Sto4g1411 941 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 728 758 IPR002885 -
Sto4g1411 941 MobiDBLite consensus disorder prediction 125 142 - -
Sto4g1411 941 Pfam PPR repeat family 554 597 IPR002885 -
Sto4g1411 941 Gene3D Tetratricopeptide repeat domain 686 834 IPR011990 GO:0005515
Sto4g1411 941 SUPERFAMILY TPR-like 548 757 IPR011990 GO:0005515
Sto4g1411 941 Pfam Pentatricopeptide repeat domain 693 739 IPR002885 -
Sto4g1411 941 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 624 658 IPR002885 -
Sto4g1411 941 PANTHER OS01G0674700 PROTEIN 6 384 IPR044645 GO:0009658
Sto4g1411 941 PANTHER OS01G0674700 PROTEIN 405 937 IPR044645 GO:0009658
Sto4g1411 941 PANTHER OS01G0674700 PROTEIN 405 937 - -
Sto4g1411 941 PANTHER OS01G0674700 PROTEIN 6 384 - -
Sto4g1411 941 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 555 589 IPR002885 -
Sto4g1411 941 Pfam PPR repeat 472 498 IPR002885 -
Sto4g1411 941 Pfam PPR repeat 627 656 IPR002885 -
Sto4g1411 941 Gene3D Tetratricopeptide repeat domain 462 618 IPR011990 GO:0005515
Sto4g1411 941 Gene3D Tetratricopeptide repeat domain 619 685 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g1411 559 793 Glycosyltransferase AT1G05670 22.594 8.50e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g1411 - - aprc:113864568 1132.47