Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0316 atggCGGGAGAGGATGCTCAACTCAAGGCGGCGAAGATAGCTTACCGGAATGCCAAGGCGGAGGGGAATCGGAGGGAGGAGGCTCGATGGGCCAACGTGATCGGAGATTTGTTGAAGAACAGAGGCGAGTACGTTGAGGCTCTCAAATGGCTTCGTATAGATTATGATATTTCCCTCAAGTATTTACCTGAGAAGCATTTGCTCCCAACCTGTCAGTCTCTTGGAGAGATCTACCTTCGACTTGAGCATTTCACTGATGCCCTAACTTATCAGGAAAAACATTTAGAGCTTGCTAGGGATGCTAATGACCTTGTTGAGCAGCAAAGAGCCAGCACCCAACTAGGTCGTACTTACCATGAATTATTTTCAAGATCAGAACATGACCACCAGTCAATACGAAATGCCAAAAAGTATTTTAAGTCTGCTATGGAATTGGCACAGACTATTAAGGAGAACCCGCCAACTAATAAGTCTTCTTATATCAAGGAATATATTGATGCACACAACAACATAGGAATGCTAGAAATGGATCTTGATAACTTGGAAGAAGCTCAGGTAATCCTCAGCCGAGGACTAAAGATTTGCAATGAAGAAGAGGTCAGTAGATATGATGATGGGCGAAGCAGGCTCCATCACAACCTTGGAAATGTGTATATGGAACTGAGGATTTGGAATAAAGCTAGATATAATATTGAGATGGACATTCAGATTTGTAACCGAATTGGACATTGTCAAGGGGAAGCAAAGGGCTATATCAATCTTGGCGAAGTGAATTACAGGACTCAGATGTACGAGGAGGCCCTCTTGTGTTACAAAAAGGCTCTGGTTCTGGCAAAGTCCATGGAAGACGAGGATTCTTTGGTCAGGCAAATTcatcaaaatatcaaaattgtaAACGAAGCTACCAAAGTAATGGatgaattaaagaaagaagaacagAACCTCAAAAAACTTGAAAGAGATGTAGCCACTGCAAGAGGCACACCGCATGAGCGGAAATGTCTGCTGCAGCAAAATAAATCTCTTGATCGCCTCCTTGAGAAATCAAGCATGATCTGTGCATGGGAGAAGCATTGCAAATttgcaaagaagaagaagaaaatagccGGTGATCTTTTTGACAAGGAAAAGATTAGTGATTCATATATGGCTGTTGGAGAATCATACCAGAAGCTCAGGGAATTCAATAAAGCAATTAAATGGTACAGAAAAAGTTTAGAAATGTACAAAACTATTGGTAACATGGAGGGGCAAGCTCTAGTGAAAATTAATATTGGAAATGTTTTTGATTCTGCCCGCAATTGGAGAGGAGCACTAGAGGCATTTCAAGAGAGCTACAGGATTGCTGTGGAAGCTAACCTTCGTTCTGTACAGCTTTCTGCCCTGGAGAATATGCATTATAGCAACATGATAAGATTTGATGATGAGAATGAGACTAGGCGGTTGAAACTTCTAATTGATAAGCTGAAGAGGTCAATAGAGAAAGAGCCGGAAACAAAAACTATGCCGGAGGATTACTGCTCTGAGACTGATTCAGAAGCAAATAGTTATTTGTCAAATAGTGGGTCTGATGCCTTTTGCTCGCCAAAGACATCATATAGATCAAAAACTGTAAGTGCTGAAGAAGAGGTGAATGAGGATTTGCCTCTGATGTCTCTCTTTCAGTCCATTAAAAGTTCATCTAAAAAGAGAACAGGTCATATGGAAAGTCTTAGCAACTCTACCAAGCAAGCTGAGCAATCACCTAAAAGCTCGCCAAATCTAACCAGTAATCATCAGAATGCTGGAGGTCGTAAACGTGTCCGTGTAATCCtttctgatgatgatgattatgatgatgCTGAGATGCGGCGTTCTAACAGAAAGGCTCATGATCCCCTGTTAGAGGATTTTGCCACTTCTGATGCAATTAATAGTAGAAAAAGTATGGTCAGTCCTGCTGATAAACTTCAGGTTGACTTGCAGTATGGATCGAAATATGCAATTAATGTTGAGGAAAGCAGTAGTTCTTTTAAATGCAGAAGTCCTCATAGAGCCAGTAAAGCTGGCAGATGTTCCAGATCCTTGAGCAATGAAATAGTTGCTGAACCTGAATTTGCTAGTAGTTCCAAATGTGATACGAATGTTTCTGGAAAACTATTGCAACATGATGTTGGCCATCCCATTTTGCACAATTCTGAACATTACCAATATATTACATTCAAGATTGAAAGAGACTTTATTCACGTAGAAGCAACCTCATGTATTGTTGATGATCAATTGAATATTGAGTCTTTGAAGGCTGAAGTTGCATGCTTATACTATCAACAACTTCCTACTGGAAAAAGATCAGAGGGTTTATTGCCCATTATTCAACACTTAAAATGTGCTGGAAGACGTATAGAATCCCCCGATACTATCAAAAGTTTTAGGGAACATCTGGGAAATGATGTGGTTGAAGCTTCCATTGATGGATGGGTTCAAAAGCGCCTTATAAAAATGTACATGGACAGCTGCACGGATTTGTCTGAGGTACCAAATATGAAGGTACTCAAGAAGCTTTACAATTTAGAGGTTTCAGATGATGAGATCATTGTGTCTGACTGTGACCTGCAAGATTTGTCAGTAACACCATTGTTAAATGCTTTGCTTACCCATAAAACATTTGCAATGCTTGATCTCTCTCACAATTGCTTAGGAAATGGGACGATGGAGAAACTTCAGAAGGTATTCGTAGCATCAGGCCAAACTTATGGTGGCTTAACTCTGGATTTGCATTGCAATCGATTTGGTCCAACTGCTTTGTTTCAGATTTGTGAATGCCCAGTACTATTTGCTCGATTAGAAGTTCTTAACATTTCTGGAAACCGTCTTACTGATGCATGTGGGTCTTATCTTTCAACTATCTTAACAAAATGTACAGCCCTCTGTAGCTTGAATACGGAGAACTGTCATATCACATCCAGAACTATTCAAAAGATTGCTGATGCATTGAGCCCTGAATCTGTACTTGCACAGCTTTGTATAGgatacaacagccctgTATCTGGAAATGCTATTGTTAATCTTCTCAGTAAGCTTTCTACAATGAAAagGTTTTCTGAGCTGAACTTAAGTGGTCTAAAACTAGGCAAACCGGTTGTTGATACTCTGTGCAAGCTTGCAGGGACCACAACTTTGTCAGGACTGATGCTCGGAAGCACTGGTATTGGAATTGAAGGGGCAATGCAATTAACAGAATCATTGTTCAGTGGAGCTCATGAAATTGTGAAACTTGACCTGTCATATTGTCAGCTCACATCTAATTATGTTTTAGACAGCAGTTTTACTTTATTCTGTTCCTTGCTTGAGCTGAATCTGGAAGGAAATCCTATTATGCCCGAGGGAAGTTATGCTCTATCTTCTCTTCTCATAAATCCTCAGTGCTGCCTAAAAGTTTTGGTCCTTAGAAAGTGTCAACTTGGGCTTGCTGGAATTCTTCACATAATTGAGGCACTAGGAGAGAATAACAACCTAGAGGAGCTTAATCTTGCTGGTAATGCTGTTCCAAATGAATCCTTTGCTCTACAACACGACGTCTCAGTCGAAAGGCAATCACAAATTCTAGAGCAGAAATGCGATACATCCGAGTCTCATAAGGAGGGTTTACCCATGATTGTAGATGATACTGAAGAGGCTCTTTGCACTCTTAACACTGACTATCTTCAACTTGAAGTTGCCGACAGTGAAGACACTCCAATTAGAGTAGAAGCTGCTGCTTCTGGAATTGATGACAGTTGTGCCAGTTCATATCAAAGAAATTCTTTATCCCCAAAGTGCCAATTCATTCAACAACTTTCAAATGCAATAGGTATGGCGAAACACTTGCAATTACTTGACATTAGTGACAATGGTTTCTCTGCAGAAGATGCAGAAACATTCTATAGTTCATGGTCATCTTCTTCACGAGCCGTTTCAAGTCAGAAGCACATTACAGAGCAGACTATCCATTTCTCAACGATGGAAAATAAGTGCTGTAGAGTGAAACCATGCTGCAAGAAAGAATGA 4026 0.3942 MAGEDAQLKAAKIAYRNAKAEGNRREEARWANVIGDLLKNRGEYVEALKWLRIDYDISLKYLPEKHLLPTCQSLGEIYLRLEHFTDALTYQEKHLELARDANDLVEQQRASTQLGRTYHELFSRSEHDHQSIRNAKKYFKSAMELAQTIKENPPTNKSSYIKEYIDAHNNIGMLEMDLDNLEEAQVILSRGLKICNEEEVSRYDDGRSRLHHNLGNVYMELRIWNKARYNIEMDIQICNRIGHCQGEAKGYINLGEVNYRTQMYEEALLCYKKALVLAKSMEDEDSLVRQIHQNIKIVNEATKVMDELKKEEQNLKKLERDVATARGTPHERKCLLQQNKSLDRLLEKSSMICAWEKHCKFAKKKKKIAGDLFDKEKISDSYMAVGESYQKLREFNKAIKWYRKSLEMYKTIGNMEGQALVKINIGNVFDSARNWRGALEAFQESYRIAVEANLRSVQLSALENMHYSNMIRFDDENETRRLKLLIDKLKRSIEKEPETKTMPEDYCSETDSEANSYLSNSGSDAFCSPKTSYRSKTVSAEEEVNEDLPLMSLFQSIKSSSKKRTGHMESLSNSTKQAEQSPKSSPNLTSNHQNAGGRKRVRVILSDDDDYDDAEMRRSNRKAHDPLLEDFATSDAINSRKSMVSPADKLQVDLQYGSKYAINVEESSSSFKCRSPHRASKAGRCSRSLSNEIVAEPEFASSSKCDTNVSGKLLQHDVGHPILHNSEHYQYITFKIERDFIHVEATSCIVDDQLNIESLKAEVACLYYQQLPTGKRSEGLLPIIQHLKCAGRRIESPDTIKSFREHLGNDVVEASIDGWVQKRLIKMYMDSCTDLSEVPNMKVLKKLYNLEVSDDEIIVSDCDLQDLSVTPLLNALLTHKTFAMLDLSHNCLGNGTMEKLQKVFVASGQTYGGLTLDLHCNRFGPTALFQICECPVLFARLEVLNISGNRLTDACGSYLSTILTKCTALCSLNTENCHITSRTIQKIADALSPESVLAQLCIGYNSPVSGNAIVNLLSKLSTMKRFSELNLSGLKLGKPVVDTLCKLAGTTTLSGLMLGSTGIGIEGAMQLTESLFSGAHEIVKLDLSYCQLTSNYVLDSSFTLFCSLLELNLEGNPIMPEGSYALSSLLINPQCCLKVLVLRKCQLGLAGILHIIEALGENNNLEELNLAGNAVPNESFALQHDVSVERQSQILEQKCDTSESHKEGLPMIVDDTEEALCTLNTDYLQLEVADSEDTPIRVEAAASGIDDSCASSYQRNSLSPKCQFIQQLSNAIGMAKHLQLLDISDNGFSAEDAETFYSSWSSSSRAVSSQKHITEQTIHFSTMENKCCRVKPCCKKE 1341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0316 1341 SMART LRR_RI_2 1279 1306 - -
Sto4g0316 1341 SMART LRR_RI_2 938 965 - -
Sto4g0316 1341 SMART LRR_RI_2 1105 1132 - -
Sto4g0316 1341 SMART LRR_RI_2 1134 1161 - -
Sto4g0316 1341 SMART LRR_RI_2 879 906 - -
Sto4g0316 1341 SMART LRR_RI_2 1050 1077 - -
Sto4g0316 1341 ProSiteProfiles TPR repeat profile. 379 412 IPR019734 GO:0005515
Sto4g0316 1341 SUPERFAMILY TPR-like 9 200 IPR011990 GO:0005515
Sto4g0316 1341 ProSiteProfiles TPR repeat profile. 248 281 IPR019734 GO:0005515
Sto4g0316 1341 MobiDBLite consensus disorder prediction 559 607 - -
Sto4g0316 1341 MobiDBLite consensus disorder prediction 508 530 - -
Sto4g0316 1341 Pfam Tetratricopeptide repeat 380 449 - -
Sto4g0316 1341 Gene3D Tetratricopeptide repeat domain 5 157 IPR011990 GO:0005515
Sto4g0316 1341 Coils Coil 298 328 - -
Sto4g0316 1341 MobiDBLite consensus disorder prediction 495 530 - -
Sto4g0316 1341 Gene3D Tetratricopeptide repeat domain 158 330 IPR011990 GO:0005515
Sto4g0316 1341 MobiDBLite consensus disorder prediction 559 596 - -
Sto4g0316 1341 SUPERFAMILY RNI-like 844 1305 - -
Sto4g0316 1341 Pfam Tetratricopeptide repeat 70 103 IPR019734 GO:0005515
Sto4g0316 1341 Gene3D Ribonuclease Inhibitor 829 1330 IPR032675 -
Sto4g0316 1341 PANTHER PROTEIN TONSOKU 1 1340 IPR044227 GO:0005634|GO:0006325|GO:0009933|GO:0040029|GO:0072423
Sto4g0316 1341 SMART tpr_5 68 101 IPR019734 GO:0005515
Sto4g0316 1341 SMART tpr_5 165 198 IPR019734 GO:0005515
Sto4g0316 1341 SMART tpr_5 419 452 IPR019734 GO:0005515
Sto4g0316 1341 SMART tpr_5 208 241 IPR019734 GO:0005515
Sto4g0316 1341 SMART tpr_5 379 412 IPR019734 GO:0005515
Sto4g0316 1341 SMART tpr_5 248 281 IPR019734 GO:0005515
Sto4g0316 1341 Coils Coil 164 184 - -
Sto4g0316 1341 SUPERFAMILY TPR-like 164 448 IPR011990 GO:0005515
Sto4g0316 1341 Gene3D Tetratricopeptide repeat domain 331 504 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0316 Sto-Chr4 2441845 2451319 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0316 - - aprc:113856161 1895.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g0316 4 2441845 2451319 Sto4g0316 4 2441845 2451319 ECH