Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0160 ATGGAAGCCACTCAAGACCCGACTTCGAACCCGAGTGGCATCGACGATTCAGAGCTCGAGCTCTACACCATTCCGAGTCATTCAAGGTGGTTTTTGTGGGATGAAATTCATGAAACGGAGAGAGCATCTTTGAAAGAGTTCTTCGATGGAACCTCTATATCTAGAACGCCGAAGATCTATAAAGAATATAGAGATTTCATCATTAATAAATACAGAGAAGAGCCGTCGAGGAGGCTTACATTCACCGAGGTGAGAAAATCGTTGGTGGGAGATGTTAGTTTGCTTAACaaggtttttcttttcttggagAAGTGGGGTTTGATAAATTATGGTGCGCCTTCGAGTGATAGCGGTGATAATTCGATTGCCGAGGATGATGAGAAGTGCAAGATTAAGATTGAGGAAGGAGCCCCGAATGGAATTCGGGTAGTGGCAATGCCTAATTCGTTGAAACCTATTTCGGTGCCTCGTAACCCCAAGGATAGTGGGAATGCGATTGCCTCTGGTTTCAAATCGCCTCCTTTAGCATCATTCTCGGATGTTTACGGCGATTCGAAGAGGCAGAAGCAGTTGACTTGTGGGGTTTGCAGTAATAAATGTGATTCTGTACACTACAAAAGTACCCAGGATGATTTCATTATTTGTgctaaatgttttgaaaatgggAAGTATGGGGAGAAAAGGTCTATGGATGATTTCAAATTAAATGAGCCCAGTGAAGATAGTGGCAAACATGAAGCTGTCTGGACGGAGGCAGAAATTCTGCTTCTCCTAGAATCTGTTTTGAAGCATGGGGATGACTGGGAACTTGTAGCACAAAATGTTCAAACCAAGACTAAACTCGATTGTATATCAAAACTCATTGAGCTGCCCTTTGGCGAGTTCATGTTGGGCTCTGCTCATAAAAATGGTCACAGTAACAGTGCTAATGGCGTTGTGAATAGTGCAAAGCAAGTTCAGTCATCTTCATCTGAACACCAAGGAACTTCCAAGACAGAAGATCAAATTCCTGAGCATAAAAATGAAACTGAGCAGAATGGAGATGTTGTGAAGGAAAGCCCTTTGAAAAGACAGCGTGTTGCTGGCCCTGCCCTTTCAGATTCTAGCAGTTCGCTAATGAAGCAGGTGGGACTTATTTCTTCCATGGTCGACCCTCATATCACAGCTGCTGCAGCTGATGCAGCTGTTACAGCACTGTGTGATGAGAATTTGTGTCCGCGGGAGATATTTGATGTTGAAGAGGATTATGCTTCTGGTCCATCTTCCTTGAACAGTCTGAATGGTTATTCAGCAAgAGTTCTTGCGGGTGAAGATTCAGATACAGAGAGGTCTACTCATTCAGATATGCATGACAGATCTACAGAGAAAGATGGTATACCTTTGACGTTGCGAATAAGAGCTGCCATCGCAACTTCTCTTGGAGCAGCAGCTGCTCGTGCGAAGTTGCTGGCCGATCAGGAAGACAGAGAGATTGAACATTTAGTAGCTACTATAATTGAAGCCCAGACTGAGAAATTGCAAcacaaaattaaacattttgaagAACTGGAGCTGTTGATGGAAAAGGAACATACTGAAATTGAAGAGCTAAAGAATTCTCTCTTAACTGAAAGGATTGACGTGTTAAAGAAGACATTTAGTGCTGGAGTTTCTAGGTGGAAAGATTATCCTTCTGTAAAATCTTAG 1686 0.4158 MEATQDPTSNPSGIDDSELELYTIPSHSRWFLWDEIHETERASLKEFFDGTSISRTPKIYKEYRDFIINKYREEPSRRLTFTEVRKSLVGDVSLLNKVFLFLEKWGLINYGAPSSDSGDNSIAEDDEKCKIKIEEGAPNGIRVVAMPNSLKPISVPRNPKDSGNAIASGFKSPPLASFSDVYGDSKRQKQLTCGVCSNKCDSVHYKSTQDDFIICAKCFENGKYGEKRSMDDFKLNEPSEDSGKHEAVWTEAEILLLLESVLKHGDDWELVAQNVQTKTKLDCISKLIELPFGEFMLGSAHKNGHSNSANGVVNSAKQVQSSSSEHQGTSKTEDQIPEHKNETEQNGDVVKESPLKRQRVAGPALSDSSSSLMKQVGLISSMVDPHITAAAADAAVTALCDENLCPREIFDVEEDYASGPSSLNSLNGYSARVLAGEDSDTERSTHSDMHDRSTEKDGIPLTLRIRAAIATSLGAAAARAKLLADQEDREIEHLVATIIEAQTEKLQHKIKHFEELELLMEKEHTEIEELKNSLLTERIDVLKKTFSAGVSRWKDYPSVKS 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0160 561 Pfam Myb-like DNA-binding domain 249 287 IPR001005 -
Sto4g0160 561 PANTHER SWI/SNF COMPLEX-RELATED 19 560 - -
Sto4g0160 561 Coils Coil 484 504 - -
Sto4g0160 561 MobiDBLite consensus disorder prediction 306 330 - -
Sto4g0160 561 ProSiteProfiles SWIRM domain profile. 22 119 IPR007526 GO:0005515
Sto4g0160 561 SUPERFAMILY Homeodomain-like 19 114 IPR009057 -
Sto4g0160 561 CDD SANT 249 286 IPR001005 -
Sto4g0160 561 Coils Coil 513 533 - -
Sto4g0160 561 MobiDBLite consensus disorder prediction 331 355 - -
Sto4g0160 561 Gene3D - 245 293 - -
Sto4g0160 561 SMART sant 245 293 IPR001005 -
Sto4g0160 561 MobiDBLite consensus disorder prediction 306 368 - -
Sto4g0160 561 PANTHER BRAHMA ASSOCIATED PROTEIN 155 KDA 19 560 - -
Sto4g0160 561 Gene3D - 28 114 IPR036388 -
Sto4g0160 561 Pfam SWIRM-associated region 1 471 547 IPR032451 -
Sto4g0160 561 Pfam SWIRM domain 25 110 IPR007526 GO:0005515
Sto4g0160 561 SUPERFAMILY Homeodomain-like 246 295 IPR009057 -
Sto4g0160 561 MobiDBLite consensus disorder prediction 437 456 - -
Sto4g0160 561 ProSiteProfiles SANT domain profile. 244 295 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0160 Sto-Chr4 1178696 1182383 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0160 K11649 - gmx:100790238 724.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g0160 4 1178696 1182383 Sto4g0160 4 1178696 1182383 ECH