Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0146 ATGACCACGTCCATGGGTGCAGCAACGGGTAACATAAGGTTAAATTTTGCGGGAAAGCTGAAGGAGAAAATGATAGGGAAGCAGGAAAATGTTGTGTGTTATTGGTGGAGCAAGAAACAGAAACGAAGATTGTCGTCATTGATAACAGCAAGTGGTCAAAATCAAAGTAGTGGTCGGAAATTAGAGAAAGTGAATGGAACAAAGGTGAACGGAAGACACGTGGCAGCAGAGGATATTAGTGGATCAGGATCAGGATCAGATGCAGCACTTGTGACGAGCTTGCACGGAAGATTTGTGGAGAAGAAGTTCGTGTATAGGCAGGAGACTGCTCTGAATCATGTTACCAGCTCCGGGATTGGAGGAAACGGGTTCGGTGAGACCCGAGAGATGAGCATCCGGAAGCTCATATGGGTTGTTACCCGTATCCAAGTTCAAGTCCAGAGATACAGCAGCtgGGGAGATGTAATAGAGGTAGATACATGGGTTGATGCAGCCGGAAAGAATGGAATGCGAAGAGATTGGGTGATCAGAGATCACTACACCAAGGAGGTCATAACAAGAGCTACAAGCACATGGGTGATAATGAACAGAGAAACAAGAAGATTGTGTAAGATACCAGAAGAAGTGAGACAAGAGGTTGTTCCTTTCTACCTCAATAGAGCTTCCATTGCCACTGAACAAACTGATTCTGAAAACATTCACAAGCTCACCGATGATACTGCTGAGAGAATTCGATCCGGATTGGCTCCAAGGTGGAACGACATGGATGCCAACCAGCATGTGAACAACGTGAAATACATTGGATGGATTTTAGAGAGCGTGGCGATAAAAGTGCTGGAAGATTACTATATGAGGAGCATGACATTGGAGTACCGAAGAGAGTGTAGGCAATCCAATTTGTTGGAGTCATTGACGAGTCCAACGGGAAAACTGAGTGGTGCTTCCGCTTCCAACATGAATAACTCCATTcacacaaaaccacaccttcAATTCACCCACCTCCTTCGTCTTCAAGCTGCTAAACAAGAAGTTGTGCGAGCCAGAACTGAATGGATTTTCAAGCACAcacccaataataataattaa 1086 0.4346 MTTSMGAATGNIRLNFAGKLKEKMIGKQENVVCYWWSKKQKRRLSSLITASGQNQSSGRKLEKVNGTKVNGRHVAAEDISGSGSGSDAALVTSLHGRFVEKKFVYRQETALNHVTSSGIGGNGFGETREMSIRKLIWVVTRIQVQVQRYSSWGDVIEVDTWVDAAGKNGMRRDWVIRDHYTKEVITRATSTWVIMNRETRRLCKIPEEVRQEVVPFYLNRASIATEQTDSENIHKLTDDTAERIRSGLAPRWNDMDANQHVNNVKYIGWILESVAIKVLEDYYMRSMTLEYRRECRQSNLLESLTSPTGKLSGASASNMNNSIHTKPHLQFTHLLRLQAAKQEVVRARTEWIFKHTPNNNN 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0146 361 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 235 353 IPR029069 -
Sto4g0146 361 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 107 355 IPR045023 GO:0006633|GO:0016297
Sto4g0146 361 Pfam Acyl-ACP thioesterase 105 351 IPR002864 GO:0006633|GO:0016790
Sto4g0146 361 PANTHER ACYL-[ACYL-CARRIER-PROTEIN] HYDROLASE 107 355 - -
Sto4g0146 361 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 105 219 IPR029069 -
Sto4g0146 361 CDD 4HBT 103 196 - -
Sto4g0146 361 Gene3D Hotdog Thioesterase 98 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0146 Sto-Chr4 1121269 1122870 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0146 99 357 Acyl Lipid Metabolism Gene Families AT1G08510 54.440 2.14e-93 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0146 K10781 - gmx:100814191 427.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g0146 4 1121269 1122870 Sto4g0146 4 1121269 1122870 ECH