Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0125 ATGGATGCCATCGATTCCGTCGTCGATCCTCTCAGGGACTTCGCAAAGGACAGTGTTCGCCTTGTCAAGCGCTGCCACAAGCCTGATCGCAAAGAATTCTCAAAAGTGGCGGCCCGTACAGCTATTGGCTTCGTCGTGATGGGTTTTGTTGGGTTTTTCGTCAAGTTGATTTTCATCCCCATCAACAACATCATTGTTGGCTCTGGTTAG 210 0.4952 MDAIDSVVDPLRDFAKDSVRLVKRCHKPDRKEFSKVAARTAIGFVVMGFVGFFVKLIFIPINNIIVGSG 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0125 69 Hamap Protein translocase subunit SecE [secE]. 9 64 IPR001901 GO:0006605|GO:0006886|GO:0016020
Sto4g0125 69 PANTHER SEC61 GAMMA SUBUNIT 1 69 - -
Sto4g0125 69 Pfam SecE/Sec61-gamma subunits of protein translocation complex 13 65 IPR001901 GO:0006605|GO:0006886|GO:0016020
Sto4g0125 69 Gene3D Preprotein translocase SecE subunit 7 68 IPR023391 -
Sto4g0125 69 PANTHER PROTEIN TRANSPORT PROTEIN SEC61 GAMMA SUBUNIT 1 69 - -
Sto4g0125 69 ProSitePatterns Protein secE/sec61-gamma signature. 14 42 IPR001901 GO:0006605|GO:0006886|GO:0016020
Sto4g0125 69 SUPERFAMILY Preprotein translocase SecE subunit 4 65 IPR023391 -
Sto4g0125 69 TIGRFAM secE_euk_arch: protein translocase SEC61 complex gamma subunit, archaeal and eukaryotic 8 66 IPR008158 GO:0008320|GO:0015031|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0125 Sto-Chr4 1006644 1006949 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0125 K07342 - thj:104811586 125.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g0125 4 1006644 1006949 Sto4g0125 4 1006644 1006949 ECH