Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0119 ATGAGAAGGCCATTGAGATCTTCATCACAATCACAACACAAACACGATCACTTCGATGTCTTGCCGGACGATCTCGTCGTCTTCATTCTCTCCAAGCTCAGCTCCTccgcttcttctccttcccatTTCATCAACATTCTCTCCACATGCAAGCGATTGAATCGGTTAGGTCTGCATCATCTGGTATTATCCAAAGCAGGAGCTAAAGTATTCGCCGTGAAGGCCAAAAACTGGTCAGAATCCGCTCACCGGTTTCTCAAACTCTGCGTTAACGCCGGCAATGTCGATGCTAGCTACACTCTTGGAATgATCCGATTTTATTGTTTACAGAATCGAAGGAGCGGGCTGGCTCTTATGGCTAAGGCAGCTATGAAGTCTCACGCGTCGGCGCTTTACTCTCTTGCCGTGATACAGTTCAACGGAAGCGGTGGCTCAAAGCGCGAGAAGGATCTACGAGCCGGTGTGGCTTTGTGCGCACGCGCATCTCTCCTCGGTCACGTCGACGCGCTTCGCGAGTTAGGCCATTGCCTCCAAGACGGTTATGGTGTTCGCCAGAACATCGCCGAGGGACGGCGGTTGCTTGTCCAAGCCAACGCGCGTGAGCTTGCCTTCGTCATACGCTCCGTCACGCAATCCTCGTCGTCTCCTTCATCCCCCTCCtcactgctgacgtggcgcgcCCACCGGTATCAGAATCAGAACCACGCATGCCAGACGGATTCGGTCTGCTCATTGAGCGATTTCGTGTATAACGTGCCGGTGCCGGCGGTCCACCCGGCGAACTGGTTTCTAAGGGAATGGTTCGAGTCGGGTTCTGGAGTGCTCGGGGAGGGTCTGAGACTCTGTGCGCACATTGGATGCGGTCGTCCCGAGACGCGACCGCACGAGTTTCGCCGGTGCTCTGTTTGCGGCAAGGTGAACTATTGCTCGCGTGGGTGTCAAGCGCTTGATTGGAAATTGCGACATAAGATGGAATGCTCGCCGGTTGAACTGTGGGTTGATGATAACGGTGGTGGTGgcggaggagctcacggagacGGTGGTGCCGTGGTGGCAAATAACGAGGCCGTTGGATGA 1077 0.5135 MRRPLRSSSQSQHKHDHFDVLPDDLVVFILSKLSSSASSPSHFINILSTCKRLNRLGLHHLVLSKAGAKVFAVKAKNWSESAHRFLKLCVNAGNVDASYTLGMIRFYCLQNRRSGLALMAKAAMKSHASALYSLAVIQFNGSGGSKREKDLRAGVALCARASLLGHVDALRELGHCLQDGYGVRQNIAEGRRLLVQANARELAFVIRSVTQSSSSPSSPSSLLTWRAHRYQNQNHACQTDSVCSLSDFVYNVPVPAVHPANWFLREWFESGSGVLGEGLRLCAHIGCGRPETRPHEFRRCSVCGKVNYCSRGCQALDWKLRHKMECSPVELWVDDNGGGGGGAHGDGGAVVANNEAVG 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0119 358 Gene3D - 277 329 - -
Sto4g0119 358 PANTHER HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN 6 339 - -
Sto4g0119 358 ProSiteProfiles Zinc finger MYND-type profile. 284 326 IPR002893 -
Sto4g0119 358 SUPERFAMILY HIT/MYND zinc finger-like 280 329 - -
Sto4g0119 358 Gene3D Tetratricopeptide repeat domain 54 213 IPR011990 GO:0005515
Sto4g0119 358 SUPERFAMILY HCP-like 79 197 - -
Sto4g0119 358 Pfam MYND finger 287 326 IPR002893 -
Sto4g0119 358 PANTHER MYND DOMAIN-CONTAINING 6 339 IPR044508 -
Sto4g0119 358 SUPERFAMILY F-box domain 6 65 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0119 Sto-Chr4 959289 960575 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0119 - - adu:107463542 500.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g0119 4 959289 960575 Sto4g0119 4 959289 960575 ECH