Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0117 ATGGCACCCAATGATCTCCGCCGTCCGTTCAAGAGGCCGGACATCTCCGATCAACAGAGACGCCGAGAACAGTCGCTGCTCCGGCAAGCACAGAATCGCCGCGATGCTCAGCACCAGGCTCGCTGCTTGGCTTCCACTGCTTTCTCTCTTGCTTCCCAAACCCTCGAACCACCTGTTTCCGAATCAGAACTCGAGATTGAAGCTGTACCCGAATCCCTACCGGGTCACGAGCCCGAGAATGAGCAGGGGCCTTCGCCGAGGGACTTCAATGTTGTTCAAGCTTCCAAGCTCAAGAGCGTAGAGGCAAAGAAATGGTTCGCGAAACAGCTTATGCATCCTGAATGGATGATCGATATTCCTGATGGGCTTAGTCAAGACTGGTATGTATTTGCTAGGCCATCAGGTAAACGGTGCTTTGTTGTTTCCAGTAATGGAACAACGATTAGTAGGCTAAGGAATGGGTCTATACTGCATCGCTTTCCTTCTGCTCTTCCCAATGGGGCAAGGAAAAAAGATGTCTCCGGTTCTGCTCAATCTTATTCTATATTGGACTGCATCTTTCATGAGCTGGATCAAACTTACTATGTTATTGATATGGTTTGCTGGCGGGGCTACTCTCTCTACGACTGCACTGCTGAGTTCAGGTTTTTTTGGTTGAATTCCAAGCTTGCGGAGACTGGTGCTTGTGACTCTCCTTCACATTATCACAAGTACAGGTTCAGTCTGGTTCCAGTATACAATTGTGACCACAATGGTCTGTATGCAGCCTATACGGAAGCAGTACCATATGCCAAGGACGGCCTTCTGTTTTATAACAAGCATGCACACTACCAGACAGGAATTACACCATTAGCTTTAGTTTGGAAGGATGAAAACTGTAGTCAATATGTTATTGACACAGATAGTGAAGGACAGGTTCCGAGCCAACAGCAGGTGGTTTTGGAGCTACAAGAAGATGGGAAACTGACTACATCAGATGATCCTCCGATGGTATTTGGCTGCTTGGATGGAAGCTTTATAGCACAGTCAGAGCTGAAATCGGGATGTCTACTACGATTTGCTATCGGAGAGGGAGGATTGGTTTTTGTTGATGGGAAGCTTGAGAAAGCTGATCTACATTATCTTGGCAAAGCTAACCGTGCTCGTGCTTCTGCTGATAGTTTCTCTAAGGTTATGTTCCAGTACAGTGTTCGTCATTCTCCCCTTAGAATTGATGATCTGTTAGGATCTGTCAGCTCACCACTTCATCAAGGAAGCAAGCCTTGTGATGTTGAGATGGATGGTTGA 1287 0.4701 MAPNDLRRPFKRPDISDQQRRREQSLLRQAQNRRDAQHQARCLASTAFSLASQTLEPPVSESELEIEAVPESLPGHEPENEQGPSPRDFNVVQASKLKSVEAKKWFAKQLMHPEWMIDIPDGLSQDWYVFARPSGKRCFVVSSNGTTISRLRNGSILHRFPSALPNGARKKDVSGSAQSYSILDCIFHELDQTYYVIDMVCWRGYSLYDCTAEFRFFWLNSKLAETGACDSPSHYHKYRFSLVPVYNCDHNGLYAAYTEAVPYAKDGLLFYNKHAHYQTGITPLALVWKDENCSQYVIDTDSEGQVPSQQQVVLELQEDGKLTTSDDPPMVFGCLDGSFIAQSELKSGCLLRFAIGEGGLVFVDGKLEKADLHYLGKANRARASADSFSKVMFQYSVRHSPLRIDDLLGSVSSPLHQGSKPCDVEMDG 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0117 428 MobiDBLite consensus disorder prediction 1 40 - -
Sto4g0117 428 Gene3D DNA ligase/mRNA capping enzyme 3 315 - -
Sto4g0117 428 CDD Snurportin-1_C 105 291 - -
Sto4g0117 428 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 106 289 - -
Sto4g0117 428 MobiDBLite consensus disorder prediction 1 29 - -
Sto4g0117 428 PANTHER SNURPORTIN1 RNUT1 PROTEIN RNA, U TRANSPORTER 1 1 427 IPR017336 GO:0005634|GO:0005737|GO:0061015
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0117 K13151 - cit:102612269 662.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g0117 4 939646 943845 Sto4g0117 4 939646 943845 ECH