Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0113 ATGCAAGAGCAAGAGAGGAGCCCACGAAGCCCAGAGGCGAAGTTGGGCTTGCAAGTGGAGGATCTGTGGGACGTTCAGGAGCCACAGCTAAGTCCTACTGAGAAGCTCAATGCTTGCTTCGAAAGCATCCCTGTCTCTGCCTTCCCTTTAGGATTTTCTAACCAAGtgatTGAGATAAAATCTGACGCCACCCTAGCTGAAGCTGTTAAAATATTGTCACACCACAATATTGTGAGTGCGCCTGTGGTGGATGTTGACGCGCCTGAAGATGCTACTTGGATAGACAGATATATTGGAATAGTTGAGTTTGCTGGAATTGTTGTCTGGATTCTGCATCAGTCTGAACCTCCATCTCCTAGGAGTCCAGCCACCCCAGTCAGCGGAACAGCCATTGCTGCTGCAGCTAATGGATGCAATTTTGCTCGAGAACTTGAGATTTTAGGCCTTGGATCTGCTGCAACAACTTCAGGAAACTTTTTTGAGgatttgacttcttctgaacTTTACAAGAGTACCAAGGTTCGTGATATTTCAGGATCATTCCGCTGGGCCCCATTCCTTGCATTACAGAGATCAAACTCATTCCTGACCATGCTCTTGCTGCTTTCAAAGTACAAGATGAAGAGTATTCCTGTGGTAGATTTGGGTGCTGGGAGAATTGATAATGTTATTACACAGCCTGCTGTTATTCATATGTTAGCAGAATGTGCTGGCCTTCAATGGTTTGAGAGTTGGGGAACTAAGAAGGTATCTGATGTGGGTCTTCCTCTGGTGACATTAGATCATATCATCCAGGTTTATGAGGATGACCCAGTGCTTCAAGCATTCAAAGTGATGAGGAAAAAGAGGGTTGGAGGGGTACCTGTAATTGAGAGAGGAAGCAGTAGGGCAGTGGGTAATATAAGCTTAAGAGATGTTCAGTTCTTGCTGACTGCTCCAGAAATATACCATGATTATAGAGCTATAACAGTGAAGGACTTCCTAACAGCAGTGAGAAGGTTAAGTGATTTCGTCACATGCAAGAAGGAATGCACAATCAAAGAACTGATTCAATTGCTTGACCAACAAGATATTAATCGGATCTATGTTGTGGATGATGGTGGGAATCTGGAAGGAGTTATCACACTCAGAGACATCATCTCAAGGCTAGTACATGAGCCTCATGGCTATTTTGGTGATTTCTTTGATGGTGTTCTTCCCCAACCTCTGACTAGCCGGGTTTAG 1224 0.4387 MQEQERSPRSPEAKLGLQVEDLWDVQEPQLSPTEKLNACFESIPVSAFPLGFSNQVIEIKSDATLAEAVKILSHHNIVSAPVVDVDAPEDATWIDRYIGIVEFAGIVVWILHQSEPPSPRSPATPVSGTAIAAAANGCNFARELEILGLGSAATTSGNFFEDLTSSELYKSTKVRDISGSFRWAPFLALQRSNSFLTMLLLLSKYKMKSIPVVDLGAGRIDNVITQPAVIHMLAECAGLQWFESWGTKKVSDVGLPLVTLDHIIQVYEDDPVLQAFKVMRKKRVGGVPVIERGSSRAVGNISLRDVQFLLTAPEIYHDYRAITVKDFLTAVRRLSDFVTCKKECTIKELIQLLDQQDINRIYVVDDGGNLEGVITLRDIISRLVHEPHGYFGDFFDGVLPQPLTSRV 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0113 407 Gene3D - 46 239 IPR046342 -
Sto4g0113 407 ProSiteProfiles CBS domain profile. 257 319 IPR000644 -
Sto4g0113 407 SUPERFAMILY CBS-domain pair 222 393 IPR046342 -
Sto4g0113 407 SMART cbs_1 262 311 IPR000644 -
Sto4g0113 407 SMART cbs_1 336 384 IPR000644 -
Sto4g0113 407 SMART cbs_1 185 234 IPR000644 -
Sto4g0113 407 SMART cbs_1 55 111 IPR000644 -
Sto4g0113 407 Gene3D - 247 386 IPR046342 -
Sto4g0113 407 CDD CBS_pair_SF 261 380 - -
Sto4g0113 407 ProSiteProfiles CBS domain profile. 331 391 IPR000644 -
Sto4g0113 407 CDD CBS_pair_SF 199 306 - -
Sto4g0113 407 ProSiteProfiles CBS domain profile. 52 118 IPR000644 -
Sto4g0113 407 SUPERFAMILY CBS-domain pair 28 234 IPR046342 -
Sto4g0113 407 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT GAMMA 1-RELATED 1 407 - -
Sto4g0113 407 Pfam CBS domain 55 102 IPR000644 -
Sto4g0113 407 Pfam CBS domain 262 306 IPR000644 -
Sto4g0113 407 Pfam CBS domain 335 384 IPR000644 -
Sto4g0113 407 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 1 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0113 Sto-Chr4 919751 922876 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0113 - - gmx:100818156 649.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g0113 4 919751 922876 Sto4g0113 4 919751 922876 ECH