Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0112 ATGAATAATCTTGTAAAGAATGTTACGGCATCGTCCCTTGTAAGTAATTCTGGAACTGTTCCACAATCCACCCCAGCGAGCCAGCCAACCCACCTTCTCTCTCAGTCACAGTCTCCAACACAAGGTGTGTCTCACTTTCCTGGACACTTTCAGctttctgagcctcaagctcAGGCACAATATGCACAGGCTCATGCTCGTATGCAATCTCAGACTTCCCATGCTCAATTTCAACCTCAAACGCAGCCGATAGTTTCCCAGCTGCATAACACTAATACTAATACTGCTACCATGACTCCTCCATCTGTCTCAACTCCTAGCACTGGAAGTGCCAAGCGTGCAAGTCAGAGACCTCCTTCTAGGCCCACTGGTTCATCCAATGCCAATTCATCTTCGCCGTTTAAGACCATGGAATTGACCCCGGCTGCTAGGCGGAAGAAGCAGAAATTACCAGAGAAGCAAATACCAGAGAAGGTGGCTGCAATTCTGCCAGAGTCTGCCCTTTATACTAAATTGCTTGAATACGAGGCTCAGATAGATGCTACTCTGGCCAGGAAAAAGACTGACGTTAAGGAGTCTATTAGAATCCCTCCCCGTGTTCAGAAAACTTTACGCATTTATGTGTATAATACCTTTTCTAATCAGACAGAAATAGATCCTGAGAAGAAAAATGTAGAGGAATCTTCTTGGTCACTTAAGATAACAGGAAGGATATTGGAAGATGGTAAGGATCCTGTGGTAGCTGGAGTTTTACAGAAGTCGAGCTCTGTGTACCCAAAGTTCTCATCCTTCTTCAAGAAAATTACCATATACTTGGATCAGAACCTCTATCCTGATAATCATGTCATCGTATGGGAGAGTGCTCGTTCAAGTATCCAACAGGAGGGTTTTGAGGTAAAGAGGAAAGGAGACAAAGAATTCACTGCAGTGATCAGAATAGAAATGAATTATGCACCTGAGAAGTTCATGGTTTCAGCACAACTCTCTAACCTCCTAGGGATTGAGTATGAGACTCGCCCAAGAATAATAGCTGCTCTTTGGCACTATGTGAAGTCCAGGAAGCTGCAAAGCCCAAATGACACTTCATTCTTCATGTGTGATCCTCCTCTTCAAAGGGTGTTTGGTGAAGAGAAGATAAAATTCTCTATGGTTGCTCAGAAGATATCACAACATTTGTCACAATTACAGCCCATACATTTGCAGCACAAAATCAGGCTTTCGGGAAATTGTCCTGCTGGAACTACATGTTATGATGTGCAAGTTGATGTGCCTTTTCCATTGGAGAAGGATATGTCTTCATTCTTGGAAAGCATTGAGAGGCATAGAGAGATTGATGCTTGCGATGAAGTGATCTCAAATGCCATGAAGAAGATCCATGAGCATCTTAGAAGGCGTGCTTTCTTTCTTGGATTTAGTCAGTCCCCAGCAGAGTTTATTAATGCTCTGATTGCTTCTCAGAGCAAGGATTTAAAGCATGTTGCCGGAGATGCTACCCATGATGCTGAAAGGGAAAGGCGTTCTGAATTCTACAATCAACCATGGGTTGAGGATGCTGTCATTCGTTACCTAAACCGCAAAACTGCTGAAAATAATGTTCATGGAAGCACCTAA 1611 0.4283 MNNLVKNVTASSLVSNSGTVPQSTPASQPTHLLSQSQSPTQGVSHFPGHFQLSEPQAQAQYAQAHARMQSQTSHAQFQPQTQPIVSQLHNTNTNTATMTPPSVSTPSTGSAKRASQRPPSRPTGSSNANSSSPFKTMELTPAARRKKQKLPEKQIPEKVAAILPESALYTKLLEYEAQIDATLARKKTDVKESIRIPPRVQKTLRIYVYNTFSNQTEIDPEKKNVEESSWSLKITGRILEDGKDPVVAGVLQKSSSVYPKFSSFFKKITIYLDQNLYPDNHVIVWESARSSIQQEGFEVKRKGDKEFTAVIRIEMNYAPEKFMVSAQLSNLLGIEYETRPRIIAALWHYVKSRKLQSPNDTSFFMCDPPLQRVFGEEKIKFSMVAQKISQHLSQLQPIHLQHKIRLSGNCPAGTTCYDVQVDVPFPLEKDMSSFLESIERHREIDACDEVISNAMKKIHEHLRRRAFFLGFSQSPAEFINALIASQSKDLKHVAGDATHDAERERRSEFYNQPWVEDAVIRYLNRKTAENNVHGST 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0112 536 MobiDBLite consensus disorder prediction 91 137 - -
Sto4g0112 536 CDD SWIB_like 324 392 - -
Sto4g0112 536 Gene3D SWIB/MDM2 domain 314 399 IPR036885 -
Sto4g0112 536 Pfam SWIB/MDM2 domain 321 392 IPR003121 -
Sto4g0112 536 ProSiteProfiles SWIB/MDM2 domain profile. 317 394 IPR003121 -
Sto4g0112 536 MobiDBLite consensus disorder prediction 1 79 - -
Sto4g0112 536 MobiDBLite consensus disorder prediction 91 152 - -
Sto4g0112 536 SMART swib_2 318 397 IPR019835 -
Sto4g0112 536 PANTHER CHROMATIN REMODELING COMPLEX SUBUNIT 94 531 - -
Sto4g0112 536 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D 94 531 - -
Sto4g0112 536 SUPERFAMILY SWIB/MDM2 domain 312 402 IPR036885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0112 Sto-Chr4 915702 917715 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-BAF60b Sto4g0112 SWIB 3e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0112 K11650 - jre:108994354 766.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g0112 4 915702 917715 Sto4g0112 4 915702 917715 ECH