Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0104 ATGGCACTTTATGTACTTCATGAATCTGCTTCTGGCTACGCTCTATTCCATGCTCATGGCCTCGATGAAATTGGGCAGAACACCGAAGCTGTTCGCAACTCCGTTTCGGATTTGAACCGCTTCGGGAAGGTTGTGCAGCTCGCGGCTTTTCTTCCTTTTGAGTCTGCACTTGATGCCCTCAAACAGTGTAATGCGGTCTCTGAAGGTAGTTTCCCTCAAGCTCTGAACTTTCGTTGTTGCATTTCCGCTGTTTACTGCAGGCTAATGGAAATTTCATTTCAATGCCTGTTAACTGATGAGCTGAGGAGCTTTTTGGAGCTTAACCTGCCTAAAGTCAAGGAAGGTAAAAAGGCTAAGTTCAGTTTAGGAGTAGCAGATCCTAAGATTGGTTCACAGATTGCTGAAGTGACGAAACTTCCATGCCAAAGTAATGATTTTGTGGGTGAGCTGCTTCGTGGTGTAAGGCTTCACTTTGATAGGTTTATGAAGGATCTGAAGCCAGGAGATTTGGAAAAAGCACAACTTGGTCTGGGGCATAGTTATAGCAGGGCAAAGGTGAAATTTAATGTCAATCGAGTTGACAACATGGTCATTCAAGCAATTTTCCTTCTTGATACTCTTGACAAAGATATTAATTCCTTCTCAATGAGAGTCAGAGAATGGTACTCATGGCATTTTCCTGAACTTGTGAAGATTGTAAATGACAACTATCTGTATGCCAAAGTTGCTAAATATATTGAGGATAAATCAAAGTTGGCAGAAGACAAAATCCCTGGTTTAACAGATATTGTTGGAGATGAAGATAAGGCAAAGGAGATAGTTGAAGCTGCCAAGGCATCCATGGgacAGGATTTGTCCCCAGTTGACTTGATCAATGTCAAACAATTTGCTCAGAGGGTAATGGATCTCTCTGAATATAGAAGGAAGCTTTATGATTATCTGGTTACTAAGATGAATGACATAGCACCAAATTTGGCCTCTTTGATTGGTGAAGTTGTTGGTGCTCGTTTGATTTCTCATGCGGGTAGTCTCACCAATTTGGCTAAGTGCCCCTCTTCTACTCTCCAAATTCTTGGTGCAGAGAAGGCATTGTTCAGGGCATTGAAAACCAAGGGAAACACTCCCAAATATGGCTTGATATTCCATTCATCCTTTATTGGTCGAGCATCTGCTAAAAATAAGGGTCGTATGGCTCGCTATCTTGCAAACAAGTGTTCAATTGCATCACGAATTGACTGCTTTTCTGAGAGTGGTACTACTGCCTTTGGGGAGAAACTTCGTGAGCAAGTTGAGGAGCGACTTGACTTTTATGATAAGGGAGTTGCACCCCGTAAGAACATAGATGTCATGAAGTCTGCTATGGAAATTGCTGAAAACAAAGATACACAGATGGAAACAGAAGAAGCATCAGGCAAGaaaagcaagaagaagaagtcGAAAGCTGCTGCtggagatgaagatgaagacatGGCTGTGGATAAGCCCGCAGAAACTGCAAATGGTGATGTGTCTGCGGAAAATAAatcagaaaagaagaagaaaaataaagaaaagaggaaattGGACCAAGAGATGGGGACAAAGGATGAGGATGGTGCTAATGGGGTTGATATTGAGCAAGATGGAGCagttaaaaagaagaagaagaaggacaaAAAAGATGGCGGGGAAGTACTAGAGAATGCACATGAaactaagaagaagaagaagaaatcgaAAGTGTAG 1725 0.3942 MALYVLHESASGYALFHAHGLDEIGQNTEAVRNSVSDLNRFGKVVQLAAFLPFESALDALKQCNAVSEGSFPQALNFRCCISAVYCRLMEISFQCLLTDELRSFLELNLPKVKEGKKAKFSLGVADPKIGSQIAEVTKLPCQSNDFVGELLRGVRLHFDRFMKDLKPGDLEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDTLDKDINSFSMRVREWYSWHFPELVKIVNDNYLYAKVAKYIEDKSKLAEDKIPGLTDIVGDEDKAKEIVEAAKASMGQDLSPVDLINVKQFAQRVMDLSEYRRKLYDYLVTKMNDIAPNLASLIGEVVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTKGNTPKYGLIFHSSFIGRASAKNKGRMARYLANKCSIASRIDCFSESGTTAFGEKLREQVEERLDFYDKGVAPRKNIDVMKSAMEIAENKDTQMETEEASGKKSKKKKSKAAAGDEDEDMAVDKPAETANGDVSAENKSEKKKKNKEKRKLDQEMGTKDEDGANGVDIEQDGAVKKKKKKDKKDGGEVLENAHETKKKKKKSKV 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0104 574 MobiDBLite consensus disorder prediction 456 574 - -
Sto4g0104 574 Coils Coil 504 524 - -
Sto4g0104 574 Pfam NOP5NT (NUC127) domain 4 69 IPR012974 -
Sto4g0104 574 Pfam snoRNA binding domain, fibrillarin 203 435 IPR002687 -
Sto4g0104 574 SMART NOSIC_2 196 248 IPR012976 -
Sto4g0104 574 PANTHER NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58 94 557 IPR045056 GO:0030515|GO:0031428|GO:0032040
Sto4g0104 574 PANTHER NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58 1 73 IPR045056 GO:0030515|GO:0031428|GO:0032040
Sto4g0104 574 Gene3D - 167 324 - -
Sto4g0104 574 Gene3D Nop domain 325 449 IPR042239 -
Sto4g0104 574 SUPERFAMILY Nop domain 189 438 IPR036070 -
Sto4g0104 574 ProSiteProfiles Nop domain profile. 321 439 IPR002687 -
Sto4g0104 574 MobiDBLite consensus disorder prediction 504 565 - -
Sto4g0104 574 MobiDBLite consensus disorder prediction 456 495 - -
Sto4g0104 574 PANTHER BNACNNG34340D PROTEIN 1 73 - -
Sto4g0104 574 PANTHER BNACNNG34340D PROTEIN 94 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0104 Sto-Chr4 857495 860643 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0104 K14564 - gmx:100779446 843.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g0104 4 857495 860643 Sto4g0104 4 857495 860643 ECH