Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0069 aTGGCTTCGGGGCCTATAGTTGGAGGAGATGATGGAGCTAAAGAGAAGCAGAGATACACGGAGAGCAAGGTGTACACGAGGAAAGCATATAAGGGACCGAAGAACAAAGCTAATGCCTTGACCGCCGTTGTTCCCAACACTGCTCCTACTACCACAGCTGCTACAAACGAGGACACGAACAACAGCTCCGTTAAGAATAGTAACGTCGATGGAACCACGAAGAATGACAATAACGTTTCTGTTCAGCCACCATCGCAGACTATATTGCCTGAGGACGCCAATTCGGCTCAGCCGCAAGTGGATTCCAGATTGGATGTGGTTTCAGATGACTTGTCTGCCTTAAACCGCCAGCAGAATGAGCCTTCAAGCCTCAATTGTcagcctgatgagccttcaagCCCTGATCATCATCAGGATGCCACTCCCAGCACTCGGGAGTTGCCAACAGCAAATGGTGCTATAAAGCCTGGATTGGATAATCGAATTAAGATAAACTTGTCTTCAAGATCGAAGCAAGAAATGCAGGAGCTCCGAAGAAAGCTTGAAAATGAGCTAGATACAGTGAGAAGTTTGGTCAGGAGGATTGAAGTGAAACAGGGGCAGATTGGTGGTTTTGGTAATTCGAATTTGCTGGTGAGTGATAGGATTGATAATGGCACAGGGCCGAGGCGTGCTCAGTCAGAGGTGGCATCTGCTGGTGTACCAAGAGAGTCTACGAGGCCATTGCACCAGTTAAGTATATCAGTGTTAGAGAATAGTCAAGGGGCCAATGAAAATGTTGAGAAGGAGAAGAGAACACCTAAGGCAAACCAGTTTTATAGAAATTCTGAGTTCCTCCTTGGGAAAGATAAATTCCCTCCTGCAGAGAGCAATAAGAAGTCAAAATTGAATGGAAAGAAGCAAGGTGGGGGTGAAATGGGGCATGGTTTTGGGGTAGGatcaaaatttttcaaaagttgTAGTTCATTGCTTGAGAAATTGATGAAACACAAGCATGGATGGGTGTTTAATGCACCTGTTGATGTTGAGGCTCTTGGATTGCATGATTATTTTACCATCATTACCCATCCAATGGACTTGGGTACTGTGAAAACAAGGTTGAACAAGAATTTTTACAAGTCGCCTAAGGAATTTGCAGAGGATGTGAGGCTTACATTTCGTAATGCAATGACATATAACCCACCAGGACAAGATGTTCATATAATGGCAGACCAGCTATCAAAGATATTTGAGGACAGATGGGCTATAATAGAATCAGATTACAATCGTGAGATGAGATATGCATTAGATTATGGGGCACCTCTTGCTGCACCTTCGCCTCTGTCTAGGAAGGTTCCTGCATTACCTCCGCCTCCTCTTGATATGAGAAAGATTTTGGATAGATCAGAATCAATGACACAACCTCCCAAATTTATGAGCATTACTCCATCAAGTAGAACCCCTGCTCCAAAGAAGCCAAAGGCAAAAGATCCTCATAAAAGGGACATGACCTATGAGGAAAAGCAAAAACTAAGCACAAACCTCCAGAGTCTACCTTCCGAGAAATTAGATACCATTGTTCAGATCATTAAAAAGAGAAATTCAGCACTTTGTCAACATGATGATGAGATTGAAGTGGACATTGATAGTGTGGATGCTGAGACTCTTTGGGAGCTGGATAGATTTGTGACCAATTATAAGAAAAGTTTGAGCAAGAACAAGCGGAAGGCGGAACTTGCCATTCAAAGAGCAGAAGCTGCGAAGAATGCCTCACAAACGGCATCTGTCATGGTAGAGGTTCCGAAAGAAAATGTAGCAGATGAAGGGAATGTTCCCCCACCTTTGCCTGCAGAAGGGAATAAACAAATGGATAATGGTAGTAGGTCGAGTAGTTCTAGCAGCTCAAGTAGCGATTCTGGATCTTCTTCAAGTGATTCTGATAGTGAAAGTTCTTCAGCATCTGGATCTGATGCAGGATCGCAAGGAACCTGA 1971 0.4313 MASGPIVGGDDGAKEKQRYTESKVYTRKAYKGPKNKANALTAVVPNTAPTTTAATNEDTNNSSVKNSNVDGTTKNDNNVSVQPPSQTILPEDANSAQPQVDSRLDVVSDDLSALNRQQNEPSSLNCQPDEPSSPDHHQDATPSTRELPTANGAIKPGLDNRIKINLSSRSKQEMQELRRKLENELDTVRSLVRRIEVKQGQIGGFGNSNLLVSDRIDNGTGPRRAQSEVASAGVPRESTRPLHQLSISVLENSQGANENVEKEKRTPKANQFYRNSEFLLGKDKFPPAESNKKSKLNGKKQGGGEMGHGFGVGSKFFKSCSSLLEKLMKHKHGWVFNAPVDVEALGLHDYFTIITHPMDLGTVKTRLNKNFYKSPKEFAEDVRLTFRNAMTYNPPGQDVHIMADQLSKIFEDRWAIIESDYNREMRYALDYGAPLAAPSPLSRKVPALPPPPLDMRKILDRSESMTQPPKFMSITPSSRTPAPKKPKAKDPHKRDMTYEEKQKLSTNLQSLPSEKLDTIVQIIKKRNSALCQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAELAIQRAEAAKNASQTASVMVEVPKENVADEGNVPPPLPAEGNKQMDNGSRSSSSSSSSSDSGSSSSDSDSESSSASGSDAGSQGT 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0069 656 ProSiteProfiles Bromodomain profile. 328 400 IPR001487 GO:0005515
Sto4g0069 656 MobiDBLite consensus disorder prediction 283 305 - -
Sto4g0069 656 MobiDBLite consensus disorder prediction 116 159 - -
Sto4g0069 656 SUPERFAMILY Bromodomain 314 422 IPR036427 GO:0005515
Sto4g0069 656 Coils Coil 164 198 - -
Sto4g0069 656 MobiDBLite consensus disorder prediction 1 20 - -
Sto4g0069 656 MobiDBLite consensus disorder prediction 40 100 - -
Sto4g0069 656 ProSiteProfiles NET domain profile. 486 567 IPR027353 -
Sto4g0069 656 MobiDBLite consensus disorder prediction 464 496 - -
Sto4g0069 656 Pfam Bromodomain 320 404 IPR001487 GO:0005515
Sto4g0069 656 MobiDBLite consensus disorder prediction 466 480 - -
Sto4g0069 656 CDD Bromo_plant1 317 414 IPR037377 -
Sto4g0069 656 PRINTS Bromodomain signature 331 344 IPR001487 GO:0005515
Sto4g0069 656 PRINTS Bromodomain signature 347 363 IPR001487 GO:0005515
Sto4g0069 656 PRINTS Bromodomain signature 363 381 IPR001487 GO:0005515
Sto4g0069 656 PRINTS Bromodomain signature 381 400 IPR001487 GO:0005515
Sto4g0069 656 PANTHER TRANSCRIPTION FACTOR GTE4 1 651 - -
Sto4g0069 656 SMART bromo_6 313 419 IPR001487 GO:0005515
Sto4g0069 656 Coils Coil 560 587 - -
Sto4g0069 656 Pfam Bromodomain extra-terminal - transcription regulation 496 557 IPR027353 -
Sto4g0069 656 PANTHER OSJNBA0053K19.4 PROTEIN 1 651 - -
Sto4g0069 656 MobiDBLite consensus disorder prediction 30 100 - -
Sto4g0069 656 MobiDBLite consensus disorder prediction 116 131 - -
Sto4g0069 656 Gene3D - 489 570 IPR038336 -
Sto4g0069 656 Gene3D - 305 428 IPR036427 GO:0005515
Sto4g0069 656 MobiDBLite consensus disorder prediction 615 656 - -
Sto4g0069 656 MobiDBLite consensus disorder prediction 580 656 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0069 Sto-Chr4 575899 578174 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0069 - - aprc:113855316 824.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g0069 4 575899 578174 Sto4g0069 4 575899 578174 ECH