Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0058 ATGGCTTCCACTATATCTCACCTTCCCGATGAGCTTCTCTCCAACGTCTTCTCCGCCATCTCCGACACTCGCACTCGCAACTCACTCTCTCTTGTCTGCCGGAGCTTTCTCCGTCTCGAGAGGAAGACCCGCACCTCCCTCACGCTCCGCGGCAACGCGCGTGACCTTCACCTCATCCCTACCTCCTTCAGCTACGTCACTCACCTCgacctctctcttctctctccttGGGGCCATGGCCTCTTCTCCACAACCTCCTACTCCGATCCTCGCCTCCTCGCCCTCCGTCTACGCGATGCTTTCCCGCGCGTGACTTCACTCACTGTCTACGTTCGTACGCCCACCACGCTCCAGTTGCTCCTGCTCGTTCCCTGGCCGGAATTGCGACACGTCAAACTCGTCCGCTGGCATCAACGGCCAGCGTCGGCGCCGGGCTCCGACTTCGCCGTTTTGTTTGAGAAATGCAAATCGCTGTGGTCGTTGGACCTATCTAGCTTCTACCACTGGACCGAGGATCTCCCTCCGGTTTTACTGGCTAATCCGGTCGCGGCCGCCTCGCTGAAGCGGTTGAACTTGCTGACGACGTCGTTTACGGAGGGGTTTAGGGCTCATGAAATCCAGTCCATCACTGCGGTTTGCCCTAACCTTGAGCAGCTTCTGGTAGCTTGTACCTTCGATCCGAGGTACCTTGGGTATGTGGGAGACGAAGCTCTCTTGGCTGTAGCTTCCAACTGCACTAAGCTTTCGCTTCTTCATCTTGCCGATACGTCGTCGTTGGCCAACCGGAGGGGAGACCCCGTGGACGAAGGGTTCACCGCAGAGGATGCTAGGATCAGCCGTGCAACACTAATTGAGTTGTTTTCTGGGCTTCCTCAGGTGGAAGAGTTGGTGCTAGATGTATGTAAGAATGTGAGAGATACTAGTTTAGCCCTGGAAGTGCTCACTTCCAAATGCCCTAAGTTGAAGGTCCTCAAGTTAGGCCAATTTCATGGAATTTGCATGGCCGTTGGATCGCAGCTTGATGGGATTGCCCTTTGCCAAGGACTCGAATCTTTGTCCATTAAGAACTGCGCAGACTTGACGGACATGGGTTTGATAGAGATTGCCAGAGGTTGTTCAAGATTGGTTAAGTTTGAAGTACAGGGATGCAAACAGATTACGGAGAAAGGGTTGAGGACGATGACTTGTCTGCTTCGCAGGACTCTGATTGATGTTAAGATTTCTTGCTGTTTGAATCTTGATACTGCAGCGTCTCTGAGAGCGCTGGAGCCCATTCGTGATCGGATTGAGCGGCTTCATGTGGATTGCGTGTGGAATGGCTTGAAAGAAACTGATAATCTGGTCCTTGATTTTGACCTCAATAGCTTGGATGAACCATGTTCTTCAGACCCCAAGGCTGCTGAAGAATTTGCAGATTACTTTGGGAGTAACACAGAATACGAAGAAGACGCAAGCAAAAGGAAGAGGCAGAGATGCAACTATTCATCAGAAGCTGATTGGAGTAATGGAAATGGTTTCTGGTGCAACAGCTGGGACAGATTGAAATACCTTTCTCTTTGGATAGGAGTTGGTGACCTGCTGACTCCTTTGCCAATGGCAGGACTGGAAGATTGCCCCAACTTGGAAGAGATTCGTATAAGGGTGGAAGGAGATTGCCGAGGCCGACCCAAACCATCGGAGCGGGAATTCGGGTTGAGCATTCTGGCATGTTATCCTCAGCTCACAAAGATGCAGTTGGATTGTGGCGAGACCAGAGGTTATGCACTTACAGCACCTTCAGGGCAGATGGATTTGAGCCTGTGGGAGAGGTTCTTCCTCAATGGTATTGGCGCTTTGACTCTACATGAACTTGATTACTGGCCACCACAAGATGAAGATGTGAACCAAAGGAGCTTATCACTTCCAGCTGCTGGCTTGCTTCAAGAGTGTTATACTCTAAGGAAACTCTTCATTCATGGAACTGCTCATGAGCATTTCATGAATTTCTTCCTCAAGATAGGGAACTTAAGGGATGTGCAGCTGAGGGAGGATTATTATCCAGCACCAGAGAACGATATGAGTACAGAGATGAGAGTGGGTTCATGCAGCCGCTTTGAAGATGCTTTAAACAGGCGTCCAATCTATGACTGA 2130 0.5028 MASTISHLPDELLSNVFSAISDTRTRNSLSLVCRSFLRLERKTRTSLTLRGNARDLHLIPTSFSYVTHLDLSLLSPWGHGLFSTTSYSDPRLLALRLRDAFPRVTSLTVYVRTPTTLQLLLLVPWPELRHVKLVRWHQRPASAPGSDFAVLFEKCKSLWSLDLSSFYHWTEDLPPVLLANPVAAASLKRLNLLTTSFTEGFRAHEIQSITAVCPNLEQLLVACTFDPRYLGYVGDEALLAVASNCTKLSLLHLADTSSLANRRGDPVDEGFTAEDARISRATLIELFSGLPQVEELVLDVCKNVRDTSLALEVLTSKCPKLKVLKLGQFHGICMAVGSQLDGIALCQGLESLSIKNCADLTDMGLIEIARGCSRLVKFEVQGCKQITEKGLRTMTCLLRRTLIDVKISCCLNLDTAASLRALEPIRDRIERLHVDCVWNGLKETDNLVLDFDLNSLDEPCSSDPKAAEEFADYFGSNTEYEEDASKRKRQRCNYSSEADWSNGNGFWCNSWDRLKYLSLWIGVGDLLTPLPMAGLEDCPNLEEIRIRVEGDCRGRPKPSEREFGLSILACYPQLTKMQLDCGETRGYALTAPSGQMDLSLWERFFLNGIGALTLHELDYWPPQDEDVNQRSLSLPAAGLLQECYTLRKLFIHGTAHEHFMNFFLKIGNLRDVQLREDYYPAPENDMSTEMRVGSCSRFEDALNRRPIYD 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0058 709 SUPERFAMILY F-box domain 3 41 IPR036047 GO:0005515
Sto4g0058 709 Pfam F-box 7 45 IPR041567 -
Sto4g0058 709 PANTHER F-BOX PROTEIN MAX2 2 684 - -
Sto4g0058 709 ProSiteProfiles F-box domain profile. 2 49 IPR001810 GO:0005515
Sto4g0058 709 SMART LRR_CC_2 213 244 IPR006553 -
Sto4g0058 709 SMART LRR_CC_2 346 371 IPR006553 -
Sto4g0058 709 SMART LRR_CC_2 372 397 IPR006553 -
Sto4g0058 709 SUPERFAMILY RNI-like 67 414 - -
Sto4g0058 709 PANTHER UNCHARACTERIZED 2 684 - -
Sto4g0058 709 Gene3D Ribonuclease Inhibitor 6 448 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0058 Sto-Chr4 467024 469153 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0058 - - adu:107462359 1076.62