Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0046 ATGGCGGCTCTGAAGCTGCTACTCTCTCAAGCTCGACGCCATTGCCTCACTAACCATCCTTCTAACTTCCACACTCACTTTTTGATTGGGTCTCGGAGATTCCTTTCTTCATCTTCAGAACCTCATGAATCAGACTCAAATCCTCCGCCTACAAATCCTCCCACGAGAACTTCCCAACCCATTTCTATTCAGCCCGTTTCATATCCGGTGAAACCTAAAGACCCGTCGCCACCAGATGCTTCTCAACCCTCCGAAGCTCAATCACTAAATCAATCGCCGGCACCGCCGCCTCCTCGTGGGCCCACATTTGCGTCTGATAGCGCGGAATCTCGGCGGGTTTTGACCCGGGAAGATATTCGGTACGTAAAGGATGCGCCTTCTATATCGCCGGTGTCGTATCCTACGCGGGTGGCGCCGCTTCCTGAAGATAAGGTTACTGGCGCCAATGAGAACGAGGAAATTGAGAAAGAGAGGAGGAGAATTGAAGAGGAGGGTCAATTGAAGAGGAGGATTATGAGAGCAGCGGAAGAGGAGAAGATGAAGGTTCCTTTTCCCACTTTTATAAAAGTGAAGCAGAAGGAGAAGCCGCCTATCTTTGATTTGGCGGAGGCAATTCGACAAGTTAAGGCCAATGCCAAAGCAAAATTTGATGAAACTGTTGAAGTGCATGTAAGATTGGGAATTGAATCAAAGCGAACAGAGCTGCACTATTATATGCCATTGCTTTTGTCATTTCATAAGAAGATAACTATTTCAACTTTGTGGCAGGCAGTTCGTGGTACTATGATTTTGCCTCATGGTGCTCCTAAGGCCGTCAGTGTGGCTGTTTTTGCAGAAGGGGCAGAAGCAGAGGAAGCGAGAGCTGCAGGAGCTGATATAGTTGGTGGTAAAGAGCTTGTTGAGGAGATTGCTAGTGGTAATAACAAGCTCAGAGTTGACAAGTGCTTCTCAACTCCTAGAATGGCTCCTCATCTTGGAAAGATAGCACAATATCTTAGAAAGCGTAGATTGATGCCAGACAAGAAACTAGGTACTCTGACCAGTGATATTCCCGGGCAGTTGAAAGAACTAAGAAAGGGTCGTGTTGAGTTTAAAATGGAAAGTAAATCAATTGTGCATGCGGGAATTGGCAAGGTGAGCTTTACAGATGAGTATTTACGTGACAACATAGGTGCATTTATGAATGCTCTATTGCTTGCCAAGCCTGCTGGCTTAAAGAAGACTTCAAAATATGCTGGGTATGTGCTATCTGTTCATATATGCAGCACGATGGGCCCAGGATTCCCTGTTTCAATACAATCGCTATCCAGAGCAGCAGATAACTACAAGTCTCTGCATCTGGTATCATGA 1350 0.4615 MAALKLLLSQARRHCLTNHPSNFHTHFLIGSRRFLSSSSEPHESDSNPPPTNPPTRTSQPISIQPVSYPVKPKDPSPPDASQPSEAQSLNQSPAPPPPRGPTFASDSAESRRVLTREDIRYVKDAPSISPVSYPTRVAPLPEDKVTGANENEEIEKERRRIEEEGQLKRRIMRAAEEEKMKVPFPTFIKVKQKEKPPIFDLAEAIRQVKANAKAKFDETVEVHVRLGIESKRTELHYYMPLLLSFHKKITISTLWQAVRGTMILPHGAPKAVSVAVFAEGAEAEEARAAGADIVGGKELVEEIASGNNKLRVDKCFSTPRMAPHLGKIAQYLRKRRLMPDKKLGTLTSDIPGQLKELRKGRVEFKMESKSIVHAGIGKVSFTDEYLRDNIGAFMNALLLAKPAGLKKTSKYAGYVLSVHICSTMGPGFPVSIQSLSRAADNYKSLHLVS 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0046 449 SUPERFAMILY Ribosomal protein L1 192 431 IPR023674 -
Sto4g0046 449 Gene3D - 198 235 - -
Sto4g0046 449 PANTHER 54S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL 1 445 - -
Sto4g0046 449 Coils Coil 144 164 - -
Sto4g0046 449 Gene3D - 267 357 IPR016095 -
Sto4g0046 449 Gene3D - 358 443 - -
Sto4g0046 449 Pfam Ribosomal protein L1p/L10e family 209 426 IPR028364 -
Sto4g0046 449 MobiDBLite consensus disorder prediction 36 118 - -
Sto4g0046 449 CDD Ribosomal_L1 201 430 IPR028364 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0046 Sto-Chr4 401416 406741 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0046 - - lang:109351870 530.791