Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0039 ATGTCTGTTCCAGTTGGAGCTACCGACATCAACAGAAATTATGCCAACTTTGGTCCTTCCATTTGGGGCAATACTTTTCTTCAATTTGCTTCCCAATCAGtgAAAGTAGATGATTTGGAGTTGAAAGTTGCAAGAGAGGAAGTGAAGAACAAGTTTATGTTGATGTGTTCAAACAATAGTGATGAGAACAACCTCTCACAGAAACTGAAGTTGATCGACTCAGTGCAGCGTTTGGGGGTGTCTCATCATTTTGGAGGCGAAATTGAAGCAGCTTTGGGTGAGATTCATGAcaaatatacaaataataatcATGTTGTCATCTTCACTTCCAATCACCACCTTCACTCTCTTGCCTTACTCTTTCGCCTCCTTAGACAGCAAGGCTATCCCATTTCATCAGatgtattcaagaaattgaagaaggaGAATGGAGAGTTCAATGAAGAATTAGCCAATGATAGAGAAGGAATGTTAGCCCTGTATGAAGCTGCACAGTTAAAGGTTGATGGAGAGGAGATACTTGAGGAAGCTCTTGATTTCACTTTGACTCATCTAATAAATTTCTCCTCTTCCCAATTTCTTGATCAGCATGTGACCCATTGCTTAAGCCAACCTCTCCGCAAGGGATTGCCTAGGATTCAGGCAACACATTACACATCTCAATACCACCTTCTTCCTTCTCATTCTCACTTTCTCCTCAACTTTGCAAAGCTAGACTTCAATACCCTACAGAAACTCCATCAAATAGAGATTGGCAACATCACTAAATGGTGGAATAAGTCAGAGTATATGAGAAAAGTGCCTTATGCCAGAGATAGGGTGGTGGAGGCTTACTTTTGGCCTTTAGGAATGGGGTATGAGGCTGACTACAGCAGTGCAAGATTGATAATGGGCAAGTTTGTTTGTTGTATTTGTCTTCTAGATGATACCTACGATTCTTATGGCACAATGCAAGAACTACAACTCTTTACACAGGCCATTCACAGatgGGATATTAGTCCGATTCAAAGTGTTCCGGAGTGCATGAAGGTGGTGTTTGAGGCAGTTCAACAATTGTACAAAGAAATGGAGTCCTTAACTGCCAAGCAGAATACATCAAGCTTTGTAATGCCACATCTGAAACAAGCTATTTATGAGTTGTCAGAAGCATACTTGGTGGAAGCAAAATGGTGCAGTGAAGGGCACATCCCAAGCTATGAAGAGTACAAGCATAATGGGGTTGTTTCTTCTACTCTTCCACTTCAGATAGCTTCGTTTATTGGACTTACAAACTTGGCAACCAAAGAGGTATTTGATTGGATGTACACAAATCCAAAAATCATCAGAGCTGTGTCCCTTATTGGAAGGCTCATGGATGACATGGCTACTCACAAGTTTGAGCAGGAAAGAGTGCACGTAGCGTCAGGGGTGGAATGTTGCATGAAGCAATATAGGATGTCGGAAGAAGAAGCCTATAAAACACTGCAAAATGACATACTAAATTGTTGGAAGGATATAAATGAAGAGTGTCTCCTTAATTCAAATCTTGTCCCAAAGGCTGTGCTTGATTGCATCCTCAACGCGGGTCGTGTGAGTGAGTTTGTGTATGCAAACTTCCAAGATCGATTCACAAATGGGGATTTGCTCAAACGTCATCTTCTCCCATTGCTTCTCCATCCCATGCCATCACAGTAA 1674 0.4068 MSVPVGATDINRNYANFGPSIWGNTFLQFASQSVKVDDLELKVAREEVKNKFMLMCSNNSDENNLSQKLKLIDSVQRLGVSHHFGGEIEAALGEIHDKYTNNNHVVIFTSNHHLHSLALLFRLLRQQGYPISSDVFKKLKKENGEFNEELANDREGMLALYEAAQLKVDGEEILEEALDFTLTHLINFSSSQFLDQHVTHCLSQPLRKGLPRIQATHYTSQYHLLPSHSHFLLNFAKLDFNTLQKLHQIEIGNITKWWNKSEYMRKVPYARDRVVEAYFWPLGMGYEADYSSARLIMGKFVCCICLLDDTYDSYGTMQELQLFTQAIHRWDISPIQSVPECMKVVFEAVQQLYKEMESLTAKQNTSSFVMPHLKQAIYELSEAYLVEAKWCSEGHIPSYEEYKHNGVVSSTLPLQIASFIGLTNLATKEVFDWMYTNPKIIRAVSLIGRLMDDMATHKFEQERVHVASGVECCMKQYRMSEEEAYKTLQNDILNCWKDINEECLLNSNLVPKAVLDCILNAGRVSEFVYANFQDRFTNGDLLKRHLLPLLLHPMPSQ 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0039 557 CDD Terpene_cyclase_plant_C1 12 538 IPR044814 GO:0010333|GO:0016102
Sto4g0039 557 SUPERFAMILY Terpenoid synthases 228 555 IPR008949 -
Sto4g0039 557 Pfam Terpene synthase family, metal binding domain 233 498 IPR005630 GO:0000287|GO:0010333|GO:0016829
Sto4g0039 557 Pfam Terpene synthase, N-terminal domain 21 202 IPR001906 GO:0010333|GO:0016829
Sto4g0039 557 SFLD Isoprenoid Synthase Type I 231 554 - -
Sto4g0039 557 PANTHER OS04G0344100 PROTEIN-RELATED 8 551 - -
Sto4g0039 557 Gene3D Farnesyl Diphosphate Synthase 19 540 IPR008949 -
Sto4g0039 557 SFLD Terpene Cyclase Like 1 C Terminal Domain 231 554 IPR034741 -
Sto4g0039 557 Gene3D - 63 228 IPR036965 GO:0010333|GO:0016829
Sto4g0039 557 PANTHER TERPENE SYNTHASE FAMILY, METAL-BINDING DOMAIN PROTEIN 8 551 - -
Sto4g0039 557 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 19 223 IPR008930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0039 Sto-Chr4 361510 364844 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0039 K15803 K14183 gmx:100781367 567.77