Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0038 atgtctattattgCTTCAACACTTTCGCCTCATAATGATAATATTGCCTCATCCACTTTGTCTCGACATACTGCAGATTATCATCCTACCCTTTGGACTCATTATTTCCTTCAATTTGCTTCTCAATCTTTGGAAGTTGATGATGAAACGATGAAACGCATTGAAACAATGAAAGATGAAGTGAGAAAGATGCTTGTCCCTACCACTGAGAATCCGTTGGGGAAAGTTGATCTGATCGATTCAATTCAACGTTTGGGATTGAGTTATCATTTTGAAGCTGAGATTGATCAAGTGTTGCACCAAATTCATAAGCATTACGTTCAACATCACAAAATAACTCTCAACCAACAACATCATCATCTCCACTCTCATGCTCTACTCTTTAGGTTATTGAGGCAACAAGGATATTTCATTTCACCCGATGTGTTTAACAAGTTCAAGGATGAGGAAGGAAAGTTCAGTGAAGAACATAGTAAGGACGTTGAAGGAATGCTAAGTTTGTATGAAGCTGCACATCTCAGCATTCATGGAGAAACCATTTTGGACGAAGCACTTGCTTTTACTTCCACTAAACTTGGTTCTATCACTATTGATCAATCCAATTCCAACCCTTTTCTTGCAGCACAAGTCgttcaaaccttaaaccaaactCCCTATAGGGGATTGCCCAGATTAGAGGCACGAAAGTACATTTCTATCTATCATCAACACCCTTCACATAATCAACTTCTACTTACCTTGGCAAAACTAGATTTCAATACGCTGCAAAAATTGCATCAGAAGGAATTCGGCAATATTTGCAAgtgGGACGTGTGTTGCTTGGATGATCTTCCAGAATACTTGAAGTTACCTTACAAGGAagtattgaatttttttgaagAGACAGAGGAAGAAATGAGGAAGGAAGGGAGAGCATACAGCGTTCAGTATACGAAGAAGGAACTGGTAGAAGCGTACATGAGTGAAGCTAGATGGCTGAATAGGAAGTATATTCCAACGACAGAAGAATACATGAAGATAGCAACAATATCGTGTTGTTATCCATTGCTGTCCACATCATCTTTCATTGGCATGGGACACATTGCTTCTCAGCATATCTTCCAATGGGCACAAACGCACCCTAACATTTTCAAAGCTTCTTCAACTATTTGCAGGATTATGGATGACATTTTTGAGCAAGAAAGAGGTCACGTTGCGTCAGTGGTGGAATGCTATAAGAAGGAACATGGGGTGTCGAGAGAGGAAGCCATTGATGAGCTTCGTAAGAGGATTGGAAATGCATGGAAAGATATGAACCAAGAATGCCTTTATAGCAAAGTGGGGATGCCTTTTGTGGAACGACTTCTCAACCTCACTCGTTTCATGGATGTTATTTACAAACAAACAGATAACTACACTCATGCTCAAGGACTCATGAAAAACTCCATTACAGAATTGCTTCTCCATCCTCTCCCCATATAA 1461 0.3854 MSIIASTLSPHNDNIASSTLSRHTADYHPTLWTHYFLQFASQSLEVDDETMKRIETMKDEVRKMLVPTTENPLGKVDLIDSIQRLGLSYHFEAEIDQVLHQIHKHYVQHHKITLNQQHHHLHSHALLFRLLRQQGYFISPDVFNKFKDEEGKFSEEHSKDVEGMLSLYEAAHLSIHGETILDEALAFTSTKLGSITIDQSNSNPFLAAQVVQTLNQTPYRGLPRLEARKYISIYHQHPSHNQLLLTLAKLDFNTLQKLHQKEFGNICKWDVCCLDDLPEYLKLPYKEVLNFFEETEEEMRKEGRAYSVQYTKKELVEAYMSEARWLNRKYIPTTEEYMKIATISCCYPLLSTSSFIGMGHIASQHIFQWAQTHPNIFKASSTICRIMDDIFEQERGHVASVVECYKKEHGVSREEAIDELRKRIGNAWKDMNQECLYSKVGMPFVERLLNLTRFMDVIYKQTDNYTHAQGLMKNSITELLLHPLPI 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0038 486 PANTHER OS04G0344100 PROTEIN-RELATED 12 269 - -
Sto4g0038 486 PANTHER OS04G0344100 PROTEIN-RELATED 266 467 - -
Sto4g0038 486 CDD Terpene_cyclase_plant_C1 22 483 IPR044814 GO:0010333|GO:0016102
Sto4g0038 486 Pfam Terpene synthase family, metal binding domain 266 430 IPR005630 GO:0000287|GO:0010333|GO:0016829
Sto4g0038 486 Gene3D - 32 250 IPR036965 GO:0010333|GO:0016829
Sto4g0038 486 SUPERFAMILY Terpenoid synthases 240 484 IPR008949 -
Sto4g0038 486 PANTHER TERPENE SYNTHASE 2-RELATED 12 269 - -
Sto4g0038 486 PANTHER TERPENE SYNTHASE 2-RELATED 266 467 - -
Sto4g0038 486 Pfam Terpene synthase, N-terminal domain 32 214 IPR001906 GO:0010333|GO:0016829
Sto4g0038 486 Gene3D Farnesyl Diphosphate Synthase 251 486 IPR008949 -
Sto4g0038 486 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 28 240 IPR008930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0038 Sto-Chr4 354609 357281 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0038 K15803 - bvg:104896149 327.405