Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0019 atGCAGCTTCACATATCTCCAAGTTTGAGGCATGTGACTGTGCTTCCTGGAAAAGGGTTGAAAGAGTTCATCAAAGTGAAGGTTGCATCAAGGAGAGTCTCTTACAGAATGCTCTTCTATTCACTCTTGCTCTTCACATTCCTTCTTCGCTTTGTCTTTGTCTTCACTGCTGTCGATACCATTGATGGACATCATAACAAGTGCTCTACCATagGTTGCCTGGGAAAAAAAATAGGACCAAGGATTCTGGGAAGAAAGCTTGAACCAAATGTCCCAGAAGTGATATACAGAATATTAGATGAACCCACTGAGAAAGATGAAGTAGAGGGAAGATCTGACATTCCACAGACTTTAGAAGAGTTCATGACAGAAGTGAAGGAAGGAGGATATGATGCCAAGACATTTGCTATTAGACTCAGAGAAATGGTGATCCTCATGGAACAAAGGACAAGGACAGCCAAAATCCAAGAATACCTATATCGCCATGTAGCATCAAGCAGCATACCTAAGCAGCTTCACTGTCTTGACCTAAGGTTGGCAAATGAGCACACGAACAATGCACAGGCTCGCCTTCAGCTTCCATCTGCAGAACTAGTCCCTGCATTAGTGGACAACTCCTACTTCCATTTTGTTCTTGCCTCAGACAATGTTCTGGCTGCTTCTGTTGTTGCAACCTCACTTGTCCGAAACTCTCGGCGACCCAACAAGGTGGTTCTGCACATCATTACGGATAGAAAAACTTACTATCCAATGCAGGCTTGGTTCTCATTGCACCCTCTGTCACCTGCTATAATTGAGGTCAAGGCATTGCATCATTTTGACTGGCTTTCAAAAGGGAAGGTTCCTGTTCTTGAAGCAATGGAGAAAGACCAACAAGTTAGATCACAGTTCAGAGGGGGATCATCAGCTATAGTTGCAAATAACACTGACAAACCAACTGTTGTTGCAGCTAAGCTGCAAGCACTTAGTCCCAAGTATAACTCAGTGATGAACCACATAAGGATACATCTTCCAGAGTTGTTCCCAAGTCTCAACAAGGTTGTCTTCCTAGATGATGATGTTGTGATACAAACTGATCTTTCACCTCTGTGGGACATTGAAATGAATGGAAAAGTAAATGGAGCAGTAGAAACATGTACCGGAGAAGATAAGTTTGTGATGTCAAAGAGGTTGAAAAGCTATTTGAACTTTTCCCACCCCCTGATAGCCAAGAATTTTGACCCCAATGAATGTGCTTGGGCTTATGGTATGAACATTTTTGATCTGGAGGCTTGGAGGAAGACCAACATAAGCCTTACATACCATTATTGGGTTGATCAGAATATAAAATCAGACCTGAGTCTATGGCAGCTAGGGACATTACCTCCTGGATTGATAGCATTCCATGGTCACGTCCACGTAATTGATCCTTTCTGGCACATGCTGGGACTGGGATATCAAGAAAATACAAGTTTTCCTGATGCTGAGAGTGCTGGTGTCATCCATTTTAATGGCAGGGCAAAGCCATGGCTAGATATAGCTTTTCCACAACTAAGGCCATTGTGGGCTAAGTATGTCAACTTTTCAGACAGGTTCATCAAGGGCTGTCATATTAGAGCATCATAA 1605 0.428 MQLHISPSLRHVTVLPGKGLKEFIKVKVASRRVSYRMLFYSLLLFTFLLRFVFVFTAVDTIDGHHNKCSTIGCLGKKIGPRILGRKLEPNVPEVIYRILDEPTEKDEVEGRSDIPQTLEEFMTEVKEGGYDAKTFAIRLREMVILMEQRTRTAKIQEYLYRHVASSSIPKQLHCLDLRLANEHTNNAQARLQLPSAELVPALVDNSYFHFVLASDNVLAASVVATSLVRNSRRPNKVVLHIITDRKTYYPMQAWFSLHPLSPAIIEVKALHHFDWLSKGKVPVLEAMEKDQQVRSQFRGGSSAIVANNTDKPTVVAAKLQALSPKYNSVMNHIRIHLPELFPSLNKVVFLDDDVVIQTDLSPLWDIEMNGKVNGAVETCTGEDKFVMSKRLKSYLNFSHPLIAKNFDPNECAWAYGMNIFDLEAWRKTNISLTYHYWVDQNIKSDLSLWQLGTLPPGLIAFHGHVHVIDPFWHMLGLGYQENTSFPDAESAGVIHFNGRAKPWLDIAFPQLRPLWAKYVNFSDRFIKGCHIRAS 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0019 534 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 210 525 IPR029044 -
Sto4g0019 534 PANTHER GALACTURONOSYLTRANSFERASE 12-RELATED 12 532 - -
Sto4g0019 534 Pfam Glycosyl transferase family 8 211 507 IPR002495 GO:0016757
Sto4g0019 534 CDD GT8_like_1 208 520 - -
Sto4g0019 534 SUPERFAMILY Nucleotide-diphospho-sugar transferases 209 531 IPR029044 -
Sto4g0019 534 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 12 532 IPR029993 GO:0047262
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0019 Sto-Chr4 230332 233307 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0019 1 534 Glycosyltransferase AT5G54690 80.187 0.0 887
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0019 K20867 - jre:109014385 938.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0402 7 2933966 2938097 Sto4g0019 4 230332 233307 CCT