Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0004 ATGGCTCATTTACTATCTCCGGTGTACACAGAGGCTCTCAAAGTCCACAATCCATTACTGAATCTGTGTTCTAGAAGCTCATGGCGGATTCTGACGAAGACTTCAGGTCCTTGGAAGTTTGGGAATCGTGGTGGAAAGCGAAGAGGTTTTGGTAGGGTCAAGGTTGCAGCTGAGGACCCAACTTCTGTCACTGATGCTATTGCCGATGACTATTATGCAGTTCTGGGTCTGCTTCCAGATGCCACACCAGAGCAGATTAAGAAGGCCTACTACAATTGCATGAAAGCTTGTCATCCGGACTTCAGTGGCAATGACCATGAGACCACAAATTTCTGCATGTTCATCAATGAAGTGTATGAGGTACTCAGTGATCCTGTTCAGCGCATGGTTTACGATGAAATTCACGGCTATTCTTTGACTTCAATCAATCCTTTTTCGGATGATTCTATCCCAAAGGATCATGTTTTTGTTGATGAATTCAGCTGCATAGGCTGCAAGAATTGTGCCAACGTAGCCCCTGATGTGTTTGCAATAGAGGAAGACTTTGGAAGAGCTAGAGCATATAGCCAATGTGGCAACTCTGAATTAATTCAACAGGCTATTGATAGTTGCCCTGTTGACTGTATTCACTGGACATCTGCGGCACAACTATCATTACTTGAAGATGAAATGCGCCGGGTAGAAAGAGTCAATGTTGCTCTAATGCTTTCAGGAATGGGATCAGCATCAAGTGATGTATTTAGAATGGCAAGCTCCCGATGGGAGAAAAGGCAGGCAAAAGTCTTAGAACAAGCAAAAATCAGAATGATGAAGCAGAAAGGTTCTGATAAAACAGATTCATACTGGGACAACCTTTGGGGAAAACCAAAAGACTACAAAAATTCAGAGGAAGaagtgaaagagagagaaaagagagcTGCTGCTGCAGCGCGAAGATGGAGGGAGTATTCTAGGAGAGGCTCGGATAAGCCTCCCACTTTTAAACTTCCAGAGGAAGCCTCCAACAAAGACAACTGA 1017 0.4307 MAHLLSPVYTEALKVHNPLLNLCSRSSWRILTKTSGPWKFGNRGGKRRGFGRVKVAAEDPTSVTDAIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDFSGNDHETTNFCMFINEVYEVLSDPVQRMVYDEIHGYSLTSINPFSDDSIPKDHVFVDEFSCIGCKNCANVAPDVFAIEEDFGRARAYSQCGNSELIQQAIDSCPVDCIHWTSAAQLSLLEDEMRRVERVNVALMLSGMGSASSDVFRMASSRWEKRQAKVLEQAKIRMMKQKGSDKTDSYWDNLWGKPKDYKNSEEEVKEREKRAAAAARRWREYSRRGSDKPPTFKLPEEASNKDN 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0004 338 CDD DnaJ 70 124 IPR001623 -
Sto4g0004 338 Gene3D DnaJ domain 54 149 IPR036869 -
Sto4g0004 338 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 337 - -
Sto4g0004 338 ProSiteProfiles dnaJ domain profile. 70 135 IPR001623 -
Sto4g0004 338 SUPERFAMILY Chaperone J-domain 70 156 IPR036869 -
Sto4g0004 338 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 153 181 IPR017896 -
Sto4g0004 338 PANTHER OS01G0730500 PROTEIN 1 337 - -
Sto4g0004 338 Pfam 4Fe-4S single cluster domain of Ferredoxin I 157 211 - -
Sto4g0004 338 Pfam DnaJ domain 70 132 IPR001623 -
Sto4g0004 338 SUPERFAMILY 4Fe-4S ferredoxins 154 211 - -
Sto4g0004 338 SMART dnaj_3 69 127 IPR001623 -
Sto4g0004 338 Gene3D - 153 213 - -
Sto4g0004 338 PRINTS 3Fe-4S ferredoxin signature 157 168 IPR001080 GO:0005506|GO:0009055
Sto4g0004 338 PRINTS 3Fe-4S ferredoxin signature 168 178 IPR001080 GO:0005506|GO:0009055
Sto4g0004 338 PRINTS 3Fe-4S ferredoxin signature 197 209 IPR001080 GO:0005506|GO:0009055
Sto4g0004 338 PRINTS DnaJ domain signature 72 90 IPR001623 -
Sto4g0004 338 PRINTS DnaJ domain signature 90 105 IPR001623 -
Sto4g0004 338 PRINTS DnaJ domain signature 107 127 IPR001623 -
Sto4g0004 338 Coils Coil 292 312 - -
Sto4g0004 338 MobiDBLite consensus disorder prediction 271 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0004 Sto-Chr4 28874 41256 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0004 - - vra:106778489 541.191