Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g3212 CTGCCTTCTGATGAGCAACTTAGTCATGCGCGATTGATATATTCTGTTGCTCCAGCCATGGGCCACAACCAGGAATCTCATCCGGAATCACATTTTAGAGTTCCTGCAATTGTGAATGCTCTTGAAGAAATGAAGCTCACTTCAAAGTTCCGTGGCTCTGAGATCATAGAACTTCAAAATTTTGAGCCTGCCTCAGTAGATGACGTTGCGAGTGTTCATGCAAGATCCTATGTGTCTGGCCTTGAGAAGGTTATGGATCAAGCTTCAGAGAAAGGCCTTATTTTTATTGACGGCTCTGGACCAACATATGCTACTGCCACTACATTTCAGGAGTCTTTAGTTGCTGCTGGAGCTGGATTAGCCTTAGTTGACTCAGTGgTTGCAGCTTCAAAGAAAAGCACAGATCCACCTGCTGGTTTTGCTTTGATAAGACCACCGGGACATCATGCTATACCAAAAGGGCCTATGGGTTTCTGTGTTTTTGGAAATGTGGCCATTGCAGCTCGTTATGCTCAACGTGTACATGGACTAAAGCGTGTGTTCATAATTGATTTTGATGTCCATCATGGAAATGGAACAAATGATGCCTTCTATGATGATCCAGATATATTTTTCCTTTCAACTCATCAAGATGGAAGCTATCCCGGTACTGGTAAGTTTGATGAGGTGGGAACTGGAGATGGCGAAGGAGCCACCCTAAATATGCCTCTTCCAGGAGGCTCAGGTGATACTACCATGAGAACTGTGTTCGATGAAGTAATTGCACCCTGTGCTCAGAGGTTTAAGCCAGACATTATTCTTGTCTCTGCCGGGTATGATGCCCACGTGTTGGATCCACTAGCAAATCTGCAATACACAACAGGAACATATTACATGCTTGTGTCCAATATAAAACAACTGGCAAAAGATTTATGTGGAGGACGATGTGTGTTTTTCTTGGAGGGAGGGTATAATCTCAAGTCTCTCTCATACTCAGTGGCAGACTCATTCCGTGCTCTTCTTGGTGATCATAGCTTGGCACCTGAGTTTGATAAATCAAACTTTCTGTATGAAGAGCCATCAAAAAAGGTTAAACAAGCAATCCAGAGGATAAAGTCTATACATTCCCTGTGA 1113 0.434 LPSDEQLSHARLIYSVAPAMGHNQESHPESHFRVPAIVNALEEMKLTSKFRGSEIIELQNFEPASVDDVASVHARSYVSGLEKVMDQASEKGLIFIDGSGPTYATATTFQESLVAAGAGLALVDSVVAASKKSTDPPAGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRVHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKFDEVGTGDGEGATLNMPLPGGSGDTTMRTVFDEVIAPCAQRFKPDIILVSAGYDAHVLDPLANLQYTTGTYYMLVSNIKQLAKDLCGGRCVFFLEGGYNLKSLSYSVADSFRALLGDHSLAPEFDKSNFLYEEPSKKVKQAIQRIKSIHSL 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g3212 370 Gene3D Histone deacetylase domain 4 369 IPR037138 -
Sto3g3212 370 PRINTS Histone deacetylase superfamily signature 179 194 IPR000286 -
Sto3g3212 370 PRINTS Histone deacetylase superfamily signature 263 273 IPR000286 -
Sto3g3212 370 PRINTS Histone deacetylase superfamily signature 145 168 IPR000286 -
Sto3g3212 370 CDD HDAC_classII 27 334 - -
Sto3g3212 370 SUPERFAMILY Arginase/deacetylase 23 337 IPR023696 -
Sto3g3212 370 PANTHER HISTONE DEACETYLASE 2 369 - -
Sto3g3212 370 Pfam Histone deacetylase domain 27 332 IPR023801 -
Sto3g3212 370 PANTHER HISTONE DEACETYLASE 14 2 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g3212 Sto-Chr3 36889705 36894208 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g3212 - - gmx:100788664 648.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g3212 3 36889705 36894208 Sto3g3212 3 36889705 36894208 ECH