Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g3184 ATGAGTGCTTTCAATCGGAGCATTTCATCCTCCAGGACGACGTCGTTCCATCGAACTCCCAACCTCAATCGATTCCGACGCtgcttccacttccacttccttcTCATCGCCGCCTCTCTAATTTCACTCTTCGTCGCCATTCGCGACGGTTATTATATCTACGTCCTTCCTCAAACCCATCATTTCTCTACCCGCAACACATCCCTAACACACTGCGATGTCTATCAGGGAAGGTGGGTCCCCGTCCCGCCTTATTCACTGTACAATGCGACGGATTGCCCTTTCGTGGAACGAGGATTCGATTGCTTGGCTAATGGAAGGAAAGACATGAATTACCTGAATTGGAGGTGGAAACCTAATGATTGTGAGATTCCGAGGTTGAATGTAAGTTATGTTTTGGAGATGTTTCGAGGGAAAAGGATTGTTTTTGTTGGGGATTCTATGAGTAGGACTCAGTGGGAATCACTGGTGTGTATGTTGATGGGTGGGGTAGAGGATAAAAGTAGTGTTTATGAAGTGAATGGGAAAAAGGTATCAAAGCAGATTAGGTTTTTAGgggttaggtttagggatttcaATTTTACCATTGAGTTCTTTCGCTCGGTTTTCCTGGTGCAACAGGGTCCTGTGCCTAAACATGCACCAAAGAGGGTTAAATCCACGCTTAGATTGGACAGGTTGGATGATATAAGTGATAAGTGGGTTCATTCTGATGTTCTTATATTCAATACTGGCCATTGGTGGGTGCCGACTAAGCTTTTTGATATGGGTTGCTATTTCCAAGTTGGAAGGTCACTGAAAATGGGGATGTCAATTCCTGTTGCCTTCAGAACAGCACTTGGCACTTGGGCATCTTGGGTAGAGAGAAAGATTAACAAAAGTAGAACACGTGTCTTCTTTAGGACTTTTGAGCCATCTCATTGGAGGGTATCATTTTATACACTTGTAGCTTTTGCTCAGTTTAAGATAACTTTAACTCGTGTGCCAttacaggcaaaaaaaaaactcatTGATCAACCCCGAAGGACTTGCAACACAACCTCATATCCCATGATAGAAACTGATGGGAGGGACCAAAATTTGTTTTCAGAAACAGTTTTTGATGTGGTAAAGAATGTCACAGTTCCTATAAACCTTCTCCATGTCACCACTATGACGGCTTTTCGGAGTGATGCACATGTTGGAAACTGGAGTGACAATCCGTCTGTCCATGACTGTAGCCACTGGTGTCTGCCTGGAGTACCTGATATGTGGAACGAAATTATCCTGTCCCAACTATCTACTCATTATGAATTTCCTTTCCAGCAAATGGAATCACAGAGTGAGTTCAGTTACTTTGTAATGCTCTTTCTTTCACTCTGCCTTGCAGCATCTGGCATGATTTAA 1386 0.4149 MSAFNRSISSSRTTSFHRTPNLNRFRRCFHFHFLLIAASLISLFVAIRDGYYIYVLPQTHHFSTRNTSLTHCDVYQGRWVPVPPYSLYNATDCPFVERGFDCLANGRKDMNYLNWRWKPNDCEIPRLNVSYVLEMFRGKRIVFVGDSMSRTQWESLVCMLMGGVEDKSSVYEVNGKKVSKQIRFLGVRFRDFNFTIEFFRSVFLVQQGPVPKHAPKRVKSTLRLDRLDDISDKWVHSDVLIFNTGHWWVPTKLFDMGCYFQVGRSLKMGMSIPVAFRTALGTWASWVERKINKSRTRVFFRTFEPSHWRVSFYTLVAFAQFKITLTRVPLQAKKKLIDQPRRTCNTTSYPMIETDGRDQNLFSETVFDVVKNVTVPINLLHVTTMTAFRSDAHVGNWSDNPSVHDCSHWCLPGVPDMWNEIILSQLSTHYEFPFQQMESQSEFSYFVMLFLSLCLAASGMI 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g3184 461 PANTHER PROTEIN TRICHOME BEREFRINGENCE-LIKE 7 22 315 IPR029964 -
Sto3g3184 461 PANTHER PROTEIN TRICHOME BEREFRINGENCE-LIKE 7 338 428 IPR029964 -
Sto3g3184 461 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 124 424 IPR026057 GO:0016740
Sto3g3184 461 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 338 428 IPR029962 GO:0016413
Sto3g3184 461 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 22 315 IPR029962 GO:0016413
Sto3g3184 461 Pfam PMR5 N terminal Domain 71 123 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g3184 Sto-Chr3 36673975 36676123 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g3184 - - pvu:PHAVU_002G271100g 588.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g3184 3 36673975 36676123 Sto3g3184 3 36673975 36676123 ECH
Sto3g3184 3 36673975 36676123 Sto4g0301 4 2327191 2328127 ECH