Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g3169 ATGGCGATAATGGCGGGACACGACGCCGAGCTGAAGCCGGCGATGACGGCGTACCGGACTGCGAAGGCGGAGGAGAACCGGCAGGAGGAGGCCCGATGGGCGAATCTGATCGGAGACATATTGAAGAACAGAGGAGAGTACGTCGAGGCCCTCAAGTGGCTTCGAAGAGATTATGAGGTTTCTCTCAAATATTTGCCCGAGAAGCAGTTGCTCCCCACCTGTCAATCGCTTGGCGAGATTTATCTTCGGCTTGAGCGTTTCAGCGATGCTCTAACCTATCAGAAAAAGCACTTAGAGCTAGCCAGGGATGCTAATGACCTTGTTGAGCAGCAAAGAGCTAGCACCCAACTTGGTCGTACTTATTATGAATTATTTTCAAGATCAGAACATGACCATCTCTCGATAAGAAATGCAAAAAAGCATTTTAAGTCTGCTATGGAGCTAGCACAGATTCTTAAGGAGGACCCGCCAACTAATAAGTCCTCATTTGTCAAGGAATATATTGATGCACACAACAATATAGGAATGCTGGAAATGGAACTTGATAACTTGGAAGAGGCTCAAAAAATCCTGACTAGAGGACTCGAGATTTGCAATGAAGAAGAGGTCAGTGAAGATGATGATGGGCGCAGCAGGCTCCATCATAACCTTGGGAATGTGTATATGGAACTGAGGATGTGGGAAAGAGCTAGAAAAAATATTGAGAAGGATATTCATATTTGTCACAGAATCGGACATTGTCAAGGGGAAGCAAAGGGCTATATTAATCTTGGTGAAGTGCATTATAGGACTCAGAAGTATGATGAAGCACTTTCATATTACGAGAAGGCACTTACCTTGGCAAAATCAATGGAAGATGAGGATGCATTGGTTAGGCAAATTGATCAAAATATCAAAACCGTAAATGCAGCTATCAAAGTAATGGatgaattaaagaaagaagagcaAAACTTCAAAAAGCTCAAAAGATATTTGGCCACTTCAAGAGGCACATCACATGAGCGAAAATGTCTGCTGCAGCAAAATGCATCTCTTGATCGCCTCCTTGAGAAATCAAGCATGATCTTTGCATGGGAAAAGCATTGTGAATTTGCAAAGGAGAAGAAAGGAATAGCAAGTGAATTGCGTGACAATGAAAGGTTGAGTGATTCATATCTGGCTGTTGGAGAATCATACCAGAAGCTCAGAAATTTCAATGAAGCGATCAAATGGTACAAAAGGAGTTGGGAAATGTATAAAACAATTGGCAACTTAGAGGGACAAGCATTAGTGAAAATTGATATCGGGAATGTTTTGGATTCTGTTCACAATTGGAAAGGAGCACTAGAAGCATACGAAGAGAGCTACAGGATTGCTGTTGAAGCTAACCTTCCTTCTGTACAGCTTTCTGCCCTTGAGAATATGCATTATAGCAACATGATAAGATTTGATGATGAAAATGAAACCAGGAGGTTGAAACTTTTAATTGACAAACTGAAGAAGTCAATAGATAAAGAGCCTGAAACAAAAGATCTACCAGATCATTTCTGCTCAGAGACTGACACTGAACCAGATGATTATATGTCAAATAATGACTCTGATGACTTCTCTCCAAAGAAAAGTCGTAGATCAAAAACTATATCTGCTGGAGAAGAGTTGAATGATGACATGCATGTAACGTCACCTGTTCCGCCCAGAAAAAGTTCATCCCAAATAGCAGGTTATGTAGAAAGTTTTAGCAACTCTAACAAGCAAGCTGAGCAGTCACCTAGAAATTTGCCAAAAATAACAGGTAATCATCAGAAGGCTGTTGGTTGTAAACGTATCCGTGTAGTCCTTTCTGACGATGAGGAGGAGAATGATGATGAGATGGAGCGCTTAAACCGAATGCCCCATGATTACCAGTTAGATGACTTGGCTGCTTCTGATTCAATGAAGAGTAAAAGTGTGGCGAGTACTGCCAAAATTCAGGCTGTCACAGAATATGGATCCAAAAATACAATTAACGTGGAAGAAAGCAGTAGTTCTTTCAAATGCTCGAATCTTGACAGACCCATGAAAACAGCCAGAGATTCTAGATCTTTAAGCAATGATAAAGTTGCTGAACCTGATATTGCTAGTGGTTCTAAATGTGACACGAATTCCTCTGGAAAACTATTGCAACATGGTTTTGCATATACCATGAGGCGTAATTCTGAACAAGATGACTTTACATTCAAGATTGAAAATGAACTAATTCACATAGAAGCGACCTCATTTGTTGCTGATGATCAGTTGGATATTGAGTCTCTGAAGGCTGaagttgcatgcttatattatCTACAACTTCCTCGACAGAAAAGATCAGAGGGTTTGTTGCCCATTATTCAACACATAAAATGTGCTGGAAGAGATCTGGAATCCCTGGAAACTGTTGAAAATCTTAAGGAACATCTGGGAAATGACATGACTGAAGTTTCCATTGAAGGATGGGTTCAAAAGCGCTTAATAAAAATGTACATGAACTGCTGCGAAGAGTTATCTGAGGTACCAAACATGAAAGTGCTCAAGAAACTTTACAATTTGGAGGTTTCTGATGATGAGATCATTGTGAACGAGTGCGACCTGCAAGATTTGTCAGTAACCCCATTGTTAAACGCACTGCTTTTCCACAAAACATTCGCAATGCTTGATCTCTCTCACAATATGTTAGGAAATGGAACAATGGAGAAACTTCAAAAAGTGTTTGCAGCATCAGGCCAAACTTATGGTGGCTTAACTCTGGACTTGCATTGCAATAGATTCGGCCCAACTGCATTGTTTCAGATTTGTGAATGCTCAGTCCTATTTGCTCGACTGGAAGTGCTTAACTTTTCCGGAAACCGTCTTACTGATGCATGTGGATCTTATCTTTCAActatcttgaaaaattgtaCAGCCCTCTGTAGCTTGAATGTAGAGCGCTGTCATATCACATCCAGAACTATTCAAAAGATTGCCGATGCATTGGATACTAATTCTGTACTTGCACAGCTTTGTATAGGATATAACAACCCAGTTTCCGGAAATTCTGTTGTTAATCTACTGTTCAAGCTTTCTACTTTGAAAAGGTTTTCTGAGCTGAATCTGAGCGGTCTAAAATTAGGCAAACTGGTTGTTGATACCCTTTGCCAGCTTGCTGGGACCTTCACTTTATCGGGACTAATGCTTGGAAGCACGAGTCTTGGAACTGAAGGGGCAATGCAATTAGCACGATCATTGTTCAGTGGGACTCAACTTACTCAAGAACTAGTGAAACTTGACCTATCATATTGCGGGCTTACATCTAATAACTTCATAAACGCAGGCGCTACTttattttcttccattcttGAGCTGAACCTGGAAGGAAATCCTATTATGCCAGAGGGAAGCAATACTCTATCCTCACTGCTCATAAACCCTCAGTGCTGTCTGAAAGTTCTAGTCCTCAAAAACTGTCAACTTGGGCTTGCTGGAGTTCTCCACATAATTGAGGCACTAGCAGAGAACAACTACTTACAGGAGCTTAATCTAGCCGGTAATGCCATTCCCAATGAGCTTTGCTCTTCACTAGTAAAAGTGTGCCCAGAAAACCAGGACCAGAAACTAGACAGTAATGAGTTTCATAAGGTGAGTTTACCCTTGGAAGTGGACCATACTAAAGATGGTCCTAGCACATTCAGCACTGGCGATCATAAGCTTGAAGTTGCTTACAATGAAGATATTCCAACAAGAGTAGAAGCTACTGCTTCTGGAATCGATGACAGTTGTGCCAGTTCATGTCAAAGGAATTCATCATCTCCCACATGCCATCTCTTTCAAAAACTTTCAGTGGCTATTGGTTTGGCCAAGAACTTGGAATTTCTTGACCTAAGTGGTAATGGTTTCCCTGCACAGGCTTCAGAAACATTCTATAGTTCATGGTCATCAGAACCATCACGTTCAAGTCACAAGCATATTACTGATCGGATTATTCATTTCTCAAACAGTGAAAATAAGTGCTGCAGAGTGAAAGCATGCTGCAAGAAAGATTGA 4014 0.4051 MAIMAGHDAELKPAMTAYRTAKAEENRQEEARWANLIGDILKNRGEYVEALKWLRRDYEVSLKYLPEKQLLPTCQSLGEIYLRLERFSDALTYQKKHLELARDANDLVEQQRASTQLGRTYYELFSRSEHDHLSIRNAKKHFKSAMELAQILKEDPPTNKSSFVKEYIDAHNNIGMLEMELDNLEEAQKILTRGLEICNEEEVSEDDDGRSRLHHNLGNVYMELRMWERARKNIEKDIHICHRIGHCQGEAKGYINLGEVHYRTQKYDEALSYYEKALTLAKSMEDEDALVRQIDQNIKTVNAAIKVMDELKKEEQNFKKLKRYLATSRGTSHERKCLLQQNASLDRLLEKSSMIFAWEKHCEFAKEKKGIASELRDNERLSDSYLAVGESYQKLRNFNEAIKWYKRSWEMYKTIGNLEGQALVKIDIGNVLDSVHNWKGALEAYEESYRIAVEANLPSVQLSALENMHYSNMIRFDDENETRRLKLLIDKLKKSIDKEPETKDLPDHFCSETDTEPDDYMSNNDSDDFSPKKSRRSKTISAGEELNDDMHVTSPVPPRKSSSQIAGYVESFSNSNKQAEQSPRNLPKITGNHQKAVGCKRIRVVLSDDEEENDDEMERLNRMPHDYQLDDLAASDSMKSKSVASTAKIQAVTEYGSKNTINVEESSSSFKCSNLDRPMKTARDSRSLSNDKVAEPDIASGSKCDTNSSGKLLQHGFAYTMRRNSEQDDFTFKIENELIHIEATSFVADDQLDIESLKAEVACLYYLQLPRQKRSEGLLPIIQHIKCAGRDLESLETVENLKEHLGNDMTEVSIEGWVQKRLIKMYMNCCEELSEVPNMKVLKKLYNLEVSDDEIIVNECDLQDLSVTPLLNALLFHKTFAMLDLSHNMLGNGTMEKLQKVFAASGQTYGGLTLDLHCNRFGPTALFQICECSVLFARLEVLNFSGNRLTDACGSYLSTILKNCTALCSLNVERCHITSRTIQKIADALDTNSVLAQLCIGYNNPVSGNSVVNLLFKLSTLKRFSELNLSGLKLGKLVVDTLCQLAGTFTLSGLMLGSTSLGTEGAMQLARSLFSGTQLTQELVKLDLSYCGLTSNNFINAGATLFSSILELNLEGNPIMPEGSNTLSSLLINPQCCLKVLVLKNCQLGLAGVLHIIEALAENNYLQELNLAGNAIPNELCSSLVKVCPENQDQKLDSNEFHKVSLPLEVDHTKDGPSTFSTGDHKLEVAYNEDIPTRVEATASGIDDSCASSCQRNSSSPTCHLFQKLSVAIGLAKNLEFLDLSGNGFPAQASETFYSSWSSEPSRSSHKHITDRIIHFSNSENKCCRVKACCKKD 1337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g3169 1337 MobiDBLite consensus disorder prediction 525 545 - -
Sto3g3169 1337 Pfam Tetratricopeptide repeat 169 198 IPR019734 GO:0005515
Sto3g3169 1337 Pfam Tetratricopeptide repeat 383 408 IPR019734 GO:0005515
Sto3g3169 1337 ProSiteProfiles TPR repeat profile. 382 415 IPR019734 GO:0005515
Sto3g3169 1337 MobiDBLite consensus disorder prediction 572 591 - -
Sto3g3169 1337 MobiDBLite consensus disorder prediction 500 515 - -
Sto3g3169 1337 MobiDBLite consensus disorder prediction 500 564 - -
Sto3g3169 1337 SUPERFAMILY HCP-like 248 451 - -
Sto3g3169 1337 MobiDBLite consensus disorder prediction 677 691 - -
Sto3g3169 1337 Pfam Tetratricopeptide repeat 211 283 - -
Sto3g3169 1337 ProSiteProfiles TPR repeat region circular profile. 251 280 - -
Sto3g3169 1337 SMART LRR_RI_2 877 904 - -
Sto3g3169 1337 SMART LRR_RI_2 936 963 - -
Sto3g3169 1337 SMART LRR_RI_2 1135 1162 - -
Sto3g3169 1337 SMART LRR_RI_2 1048 1075 - -
Sto3g3169 1337 SMART LRR_RI_2 1106 1133 - -
Sto3g3169 1337 SUPERFAMILY TPR-like 24 156 IPR011990 GO:0005515
Sto3g3169 1337 MobiDBLite consensus disorder prediction 672 705 - -
Sto3g3169 1337 Pfam Tetratricopeptide repeat 73 106 IPR019734 GO:0005515
Sto3g3169 1337 SUPERFAMILY TPR-like 160 288 IPR011990 GO:0005515
Sto3g3169 1337 Gene3D Tetratricopeptide repeat domain 6 332 IPR011990 GO:0005515
Sto3g3169 1337 SMART tpr_5 71 104 IPR019734 GO:0005515
Sto3g3169 1337 SMART tpr_5 422 455 IPR019734 GO:0005515
Sto3g3169 1337 SMART tpr_5 168 201 IPR019734 GO:0005515
Sto3g3169 1337 SMART tpr_5 211 244 IPR019734 GO:0005515
Sto3g3169 1337 SMART tpr_5 31 64 IPR019734 GO:0005515
Sto3g3169 1337 SMART tpr_5 382 415 IPR019734 GO:0005515
Sto3g3169 1337 SMART tpr_5 251 284 IPR019734 GO:0005515
Sto3g3169 1337 PANTHER PROTEIN TONSOKU 4 1337 IPR044227 GO:0005634|GO:0006325|GO:0009933|GO:0040029|GO:0072423
Sto3g3169 1337 ProSiteProfiles TPR repeat profile. 251 284 IPR019734 GO:0005515
Sto3g3169 1337 Gene3D Tetratricopeptide repeat domain 338 499 IPR011990 GO:0005515
Sto3g3169 1337 Coils Coil 167 201 - -
Sto3g3169 1337 Gene3D Ribonuclease Inhibitor 822 1214 IPR032675 -
Sto3g3169 1337 SUPERFAMILY RNI-like 843 1301 - -
Sto3g3169 1337 MobiDBLite consensus disorder prediction 572 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g3169 Sto-Chr3 36533380 36541886 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g3169 - - aprc:113856161 1814.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g3169 3 36533380 36541886 Sto3g3169 3 36533380 36541886 ECH