Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g3161 atGGCCACCAAAGCTTTCGGCTTCCTTCTTTCTGACCTAACAACGCGCTTTGATTCCAAGCTTTCTTCGTCTTCTCCAAAACTTAGGGCTCCCTTTCTCAGATGCTCTCTCCATGTCTCCTCACACGCCGCCGCCACTGGTAAGGAGCAAAGGCCTTGGAAGAATTCAGATGCTAGACTTGTGCTGGAAGATGGTTCAATCTGGAAAGCCAAGTCATTTGGTGCTTCAGGAACCCAAGTTGGTGAAGTTGTATTTAATACATCTTTGACTGGGTATCAGGAAATCCTGACAGATCCTAGTTATGCTGGCCAGTTCGTGCTGATGACAAATCCACATATTGGGAATACTGGCATAAATTTTGATGATGAAGAATCAAGACAATGCTTCCTTGCTGGTCTAGTAATAAGAAGTTTGAGTATCAGTACTTCAAACTGGAGATGTGCAGAACCATTGGGTGATTATTTAGCCAAAAGGAATATTATGGGAATTTATGATGTTGATACACGTGCAATCACACGCAGATTAAGACAAGATGGAAGCCTTATAGGTGTATTGAGCACTGACAATtccaaaactgatgaagagcTACTTCAGATGTCTCGTTCATGGGATATTGTTGGTATTGATCTAATAAGTGGAGTATCATGCAAATCTCCCTATGAATGGGTTGATCAAACAGCACAAGAATGGGATTTTAACACCAATGGAAGTCATAGAGAGACCTTCCGTATTGTTGCTTATGATTTTGGAATCAAGCTCAATATACTTAGGCGCCTAGCATCTTATGGCTGTAAAATCACTGTTGTGCCATCTACATGGCCAGCATCAGAAACTTTAAAGTTGAAGCCAGATGGAGTTCTTTTCAGCAATGGACCTGGCGATCCCTCTGCTGTTCCTTATGCCGTTGAAACAGTAAAGAATATTCTGGGGAAGGTGCCTGTTTTTGGAATTTGCATGGGCCATCAATTATTAGGCCAGGCATTGGGAGGTAAGACCTTTAAGATGAAATTTGGTCATCACGGAGGAAATCATCCAGTTCGTAACCTTCAAACTGGCCATGTTGAAATTAGTGCTCAGAACCACAACTATGCGGTTGACCCTGCTTCATTGCCAGAAGGAGTGAAGGTTACTCATATCAATCTTAATGATGGAAGTTGTGCCGGTCTTGCTTTCCCAGCTCAAAAGATCATGTCTCTTCAATACCACCCTGAAGCATCCCCAGGACCTCATGATTCAGATTATgCTTTTAAGCAGTTTGTGGAGCTAATGAATCAAGAAAAGAACAAGAAGCCTCATGAAAATCTGCACCATCTGTCTACAATGCATGCTATGGATAGTTAG 1341 0.4161 MATKAFGFLLSDLTTRFDSKLSSSSPKLRAPFLRCSLHVSSHAAATGKEQRPWKNSDARLVLEDGSIWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGINFDDEESRQCFLAGLVIRSLSISTSNWRCAEPLGDYLAKRNIMGIYDVDTRAITRRLRQDGSLIGVLSTDNSKTDEELLQMSRSWDIVGIDLISGVSCKSPYEWVDQTAQEWDFNTNGSHRETFRIVAYDFGIKLNILRRLASYGCKITVVPSTWPASETLKLKPDGVLFSNGPGDPSAVPYAVETVKNILGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNLQTGHVEISAQNHNYAVDPASLPEGVKVTHINLNDGSCAGLAFPAQKIMSLQYHPEASPGPHDSDYAFKQFVELMNQEKNKKPHENLHHLSTMHAMDS 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g3161 446 Gene3D - 56 204 IPR036480 -
Sto3g3161 446 PANTHER CARBAMOYL-PHOSPHATE SYNTHASE ARGININE-SPECIFIC SMALL CHAIN 42 428 - -
Sto3g3161 446 SUPERFAMILY Class I glutamine amidotransferase-like 207 425 IPR029062 -
Sto3g3161 446 CDD GATase1_CPSase 244 420 IPR035686 -
Sto3g3161 446 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 243 429 - -
Sto3g3161 446 Gene3D - 205 428 IPR029062 -
Sto3g3161 446 SUPERFAMILY Carbamoyl phosphate synthetase, small subunit N-terminal domain 57 201 IPR036480 -
Sto3g3161 446 SMART CPSase_sm_chain_2 56 186 IPR002474 -
Sto3g3161 446 TIGRFAM CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 58 424 IPR006274 GO:0004088|GO:0006207|GO:0006541
Sto3g3161 446 PRINTS Glutamine amidotransferase superfamily signature 286 295 - -
Sto3g3161 446 PRINTS Glutamine amidotransferase superfamily signature 313 324 - -
Sto3g3161 446 PRINTS Glutamine amidotransferase superfamily signature 398 411 - -
Sto3g3161 446 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 244 258 - -
Sto3g3161 446 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 283 297 - -
Sto3g3161 446 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 313 329 - -
Sto3g3161 446 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 330 347 - -
Sto3g3161 446 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 355 366 - -
Sto3g3161 446 PANTHER CARBAMOYLTRANSFERASE FAMILY MEMBER 42 428 - -
Sto3g3161 446 PRINTS Anthranilate synthase component II signature 286 295 - -
Sto3g3161 446 PRINTS Anthranilate synthase component II signature 313 324 - -
Sto3g3161 446 PRINTS Anthranilate synthase component II signature 398 411 - -
Sto3g3161 446 Pfam Carbamoyl-phosphate synthase small chain, CPSase domain 60 184 IPR002474 -
Sto3g3161 446 Hamap Carbamoyl-phosphate synthase small chain [carA]. 56 427 IPR006274 GO:0004088|GO:0006207|GO:0006541
Sto3g3161 446 Pfam Glutamine amidotransferase class-I 247 421 IPR017926 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g3161 Sto-Chr3 36456634 36459711 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g3161 K01956 - qsu:111995078 731.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g3161 3 36456634 36459711 Sto3g3161 3 36456634 36459711 ECH