Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g3150 ATGGACCCAACCTATGGTTTCAGTGAAGTGCCTCTGAGTGCTTCAAATTTTAAACATGACAAGCCTTATGACTTAGAGGTGAGCCAACGGTATAGCTTCAAGAATGGAATCCATAGGCTTTGGGTTTACTCCACAGATAAACCTCTTCGCAAAGGTAGTAGAACCAATCCCCGATCCGAAATCCGAATCAAAgGGTACGATTATTCCTCAGGGGTTTGGCAATTTGAAGGGCATGGATATGTGCCTAGAGGCACTTCAGGTGTGTCCATAATGCAAGTATTTGGGTCACACCCTCCTCGTGCAACCACCTTCATGCTTTGGACTCACAATGGCTCGCTTTCATACTACAATAGTCCGATCCTGGTCCCACACATATGGGACCGGTGGTTCAAGCTAAATGTGGTCCATGACGTTGGAGCCTCTAATGTGAAGGTGTATATAGATGGCTATATGGTCTATGAAGCACATGGCCATGGAGGTTCCTCCCATTACTTCAAATTTGGAGTATATGCACAAGATCATGATTCCCACTATATGGAGTCTCGTTGGAAAGGAATTAGGGTTCTTCACAAACATTAA 579 0.4456 MDPTYGFSEVPLSASNFKHDKPYDLEVSQRYSFKNGIHRLWVYSTDKPLRKGSRTNPRSEIRIKGYDYSSGVWQFEGHGYVPRGTSGVSIMQVFGSHPPRATTFMLWTHNGSLSYYNSPILVPHIWDRWFKLNVVHDVGASNVKVYIDGYMVYEAHGHGGSSHYFKFGVYAQDHDSHYMESRWKGIRVLHKH 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g3150 192 Pfam Alginate lyase 16 190 IPR014895 -
Sto3g3150 192 PANTHER CITRATE-BINDING PROTEIN-LIKE 2 191 - -
Sto3g3150 192 Gene3D - 24 192 - -
Sto3g3150 192 SUPERFAMILY Concanavalin A-like lectins/glucanases 17 177 IPR013320 -
Sto3g3150 192 PANTHER BINDING PROTEIN, PUTATIVE, EXPRESSED-RELATED 2 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g3150 Sto-Chr3 36368323 36369925 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g3150 - - gmx:100803497 294.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g3150 3 36368323 36369925 Sto3g3150 3 36368323 36369925 ECH