Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g3075 ATGCTGGGAGTGATCTACTTTGGGTTCCATGTGATTGCATACAGTGCGCTCCCCTATCATCAAGTTACTATGCTAATCTGGTGCTCCCTCATATATGGGGCATGTATTATGCAGGATAGAGATCTGAATGAGTATAGTCCGTCTCGTTCAACATCCAGCGAGAATCTTTCTTGCAGTCATAAGTTTTGTGAGATGGGTTCAGACTGTGGAAGTTCAACGCAGCAATGTCCTTACACTATCAACTACGTCTCAGAGAATACATCAAGTTCTGGATTGTTAGTAGAAGACATATTGCATCTTGCATCAGGGGGTGATGATGAATCAAATTCTTCTGTTCAGGCTCCAGTCATTATAGGGTGTGGTATGAAGCAAAGTGGTGGTTATTTGGATGGGGTTGCCCCAGATGGTCTTATGGGTCTGGGAACTGGGGAAATTTCAGTTCCAAGTTTGCTTGCTAAATCAGGATTGATCCACAATTCCTTCTCTTTGTGTTTTGACGAAGATGATTCTGGTAGAATATTCTTTGGGGACCAAGGATCAACCATCCAACAGTCAACTCCCTTCTTGCCACTGGATGGAACATATTCAACATATATCATTGGAGTGGAGACATGTTGTGTCAGGAAATCCTGTCTTAAGATGACAAGTTTCAAAGCGCAGGTTGATAGTGGAACATCGTTTACATTTCTTCCGGGCCATGTGTATGAAGCAATTGCTGAGGAGTTTGAGCAACAAGTGAATGCTTCGAGATCTAGTTTCGAAGGATCCCCTTGGGAGTATTGCTATGCATCCAGTTCGAAGGAGCTGCCCAACGTTCCTTCCTTAACATTCATGTTCCAAAATAGCAGTTTTGTGGTCCACAATCCTGTATTTGTGTTTTATGACAGTCAGGGAGTTATTGGATTTTGTTTAGCAATACAACCAAGCGAAGGAAATATGGGAACCATTGGACAGAATTTCATGACGGGCTACCGGCTAGTATTTGATAGGGACAACATGAAGTTATCCTGGTCACGCTCAAATTGTCAGGATCTTAGTGTTGGAAAGAGTATGCCTCTTACCCCTCCAAATAAGACACCATCAAACCCTTTGCCTGCAGATGAGCAGCAGAGAACCAATGGGCATGCAGTTGCTCCAGCTGTTGCTGGAAGAGCTCCCCACAAATCATTAGCAGCTTCATCTCGGATGATGTCATGCCGACAACAATATtggtgtttttgtttgtttcttcttcttgtcttAGCCCTTTAA 1251 0.4245 MLGVIYFGFHVIAYSALPYHQVTMLIWCSLIYGACIMQDRDLNEYSPSRSTSSENLSCSHKFCEMGSDCGSSTQQCPYTINYVSENTSSSGLLVEDILHLASGGDDESNSSVQAPVIIGCGMKQSGGYLDGVAPDGLMGLGTGEISVPSLLAKSGLIHNSFSLCFDEDDSGRIFFGDQGSTIQQSTPFLPLDGTYSTYIIGVETCCVRKSCLKMTSFKAQVDSGTSFTFLPGHVYEAIAEEFEQQVNASRSSFEGSPWEYCYASSSKELPNVPSLTFMFQNSSFVVHNPVFVFYDSQGVIGFCLAIQPSEGNMGTIGQNFMTGYRLVFDRDNMKLSWSRSNCQDLSVGKSMPLTPPNKTPSNPLPADEQQRTNGHAVAPAVAGRAPHKSLAASSRMMSCRQQYWCFCLFLLLVLAL 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g3075 416 PANTHER ASPARTIC PROTEINASE-LIKE PROTEIN 1 27 359 - -
Sto3g3075 416 SUPERFAMILY Acid proteases 40 343 IPR021109 -
Sto3g3075 416 MobiDBLite consensus disorder prediction 346 375 - -
Sto3g3075 416 Gene3D Acid Proteases 178 344 IPR021109 -
Sto3g3075 416 ProSiteProfiles Peptidase family A1 domain profile. 32 338 IPR033121 -
Sto3g3075 416 Pfam Xylanase inhibitor N-terminal 39 177 IPR032861 -
Sto3g3075 416 Pfam Xylanase inhibitor C-terminal 216 338 IPR032799 -
Sto3g3075 416 PANTHER ASPARTYL PROTEASES 27 359 IPR001461 GO:0004190|GO:0006508
Sto3g3075 416 Gene3D Acid Proteases 23 177 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g3075 Sto-Chr3 35591307 35595539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g3075 56 345 Miscellaneous Gene Families AT1G44130 24.444 4.24e-16 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g3075 - - gmx:100782209 603.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g3075 3 35591307 35595539 Sto3g3075 3 35591307 35595539 ECH