Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g3073 ATGGGAGTTGCAGGCACTCTGGAGTACTTATCTGATTTAATGGGAAATGGAGACCACCACATGAACAacaagaggaggaggaagaagaagaagccattgCAAACTGTGGAACTCAAGGTTAGGATGGACTGTGATGGGTGTGAGCTTAAGGTCAAGAAAGCCCTCTCTTCATTGACCGGAGTAAAATCAGTGGACATAAACAGGAAACAACAGAAGGTGACAGTGAGCGGGTATGTTGAAGCAAACAAGGTCTTAAAGAAGGCTAAATCCACAGGGAAAAAAGCTGAGATATGGCCCTATGTGCCTTACAATTTAGTGGCACACCCTTATGCTGCTTCAGCTTATGACAAGAAGGCTCCTCCTGGTTATGTGAGGAACATAGAGAGCAGCAGCACAGGTATAGCCACGGTTGGAACCGTCGCAAAATATGATCAACACCCTTATGTCACCATCTTCAGTGATGAAAACCCTAATGCTTGCTCCATCATGTAA 492 0.4207 MGVAGTLEYLSDLMGNGDHHMNNKRRRKKKKPLQTVELKVRMDCDGCELKVKKALSSLTGVKSVDINRKQQKVTVSGYVEANKVLKKAKSTGKKAEIWPYVPYNLVAHPYAASAYDKKAPPGYVRNIESSSTGIATVGTVAKYDQHPYVTIFSDENPNACSIM 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g3073 163 Pfam Heavy-metal-associated domain 39 94 IPR006121 GO:0046872
Sto3g3073 163 ProSiteProfiles Heavy-metal-associated domain profile. 42 97 IPR006121 GO:0046872
Sto3g3073 163 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 4 163 IPR045181 GO:0046872
Sto3g3073 163 Gene3D - 20 99 - -
Sto3g3073 163 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 20 4 163 - -
Sto3g3073 163 CDD HMA 37 96 IPR006121 GO:0046872
Sto3g3073 163 SUPERFAMILY HMA, heavy metal-associated domain 33 99 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g3073 Sto-Chr3 35578951 35580250 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g3073 - - pop:7477104 247.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g3073 3 35578951 35580250 Sto3g3073 3 35578951 35580250 CCT
Sto3g3073 3 35578951 35580250 Sto3g3073 3 35578951 35580250 ECH
Sto3g3073 3 35578951 35580250 Sto4g0397 4 3111559 3112315 ECH