Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g2976 ATGGAGTGTGTCTCCGCCGCGATCTCCATTTGCTTTCTCCTTGTTTTGTACATTCAGAGGGGACTGCTTTCAAAAGCTGATATTAGAGTTGATTTTGAAATGCTTTTTTATaactacatatcaaaagctgtttATAATAGAGCTACTTTGACAATGGGCTTATTTGAAAGTGTGACATCCAAAAATATATCTGAGAATGCGATAATCCTACCGCGAGCAAGCTTCCCACCAAGAGGTTGGAATTCTTATGATTCCTTTTGCTGGACAATTTCTGAAGAAGAATTCTTACAAAGTGCCAAAATCATCTCTCAGAGACTCCATGTTCATGGATATGAGTATGTTGTGGTGGATTACCTCTGGTATAGAAGGAAAGTCCCGGGTGCTTATACTGATTCCCTTGGATTCGATGTCATTGATGAATGGGGGAGGATGATCCCAGACCCAGGAAGATGGCCTTCTTCCAAGGGTGGAACTGGGTTCAAGGAAGTGGCTGATAAAGTGCATAGCatgggtttgaagtttgggaTTCATGTTATGAGAGGGATAAGCACCCAAGCAGTCAATGCAAACACCCCAATCCTAGATACAAGGAAGGGAGGCACATATCAGGAATATGGTAAAGTATGGCGTGCAAAAGACATAGCAATCCCAGAAAGGGCTTGCGCATGGATGCCTCATGGTTTCATGAGCGTCAATACAAAGTTGAGGGCTGGAAGAGCCTTTTTGAGGTCCCTCTATGAGCAGTATGCTTCATGGGGTGTTGATTTTGtgAAACATGACTGTGTATTTGGCGATgacttggatttgagtgaaaTAACTTATGTATCAGAGATTCTCAGTGAGCTTGATCGCCCCATTGTATATTCTTTGTCTCCTGGAACCAGTGCGACACCAGCCATGGCCAAGGAAGTCAGTGGACTAGTTAACATGTATCGCATAACAGGAGATGACTGGGATACATGGGGAGATGTCACAGCTCATTTTGATGTAACGAgGGATTTTTCCAAAGCTAATATGATAGGAGCACAAGGTTTAATGGGAAATTCCTGGCCTGATTTGGACATGCTACCATTGGGATGGCTAACTGATCCAGGTTCAAATGAGGGTCCACACAGGTATAGTCGCCTCAATCTAGACGAACAAAAAACTCAGTTTCCTTTTATCACAAGCTCGAAGAAGATGAATATTCATGATCAAGATCTTATGAGGCAAATGAGAGGATCTAAGAGAGATACACCAACAtcatatacatatttaattagtctCACTGGCTGTACCGAATCAAGGGCTGTTGGTTGGTCAATTGAAAGTCTTAATCAAGACGTTGAAAGAATCTGTTGGAAAAGGAATTTAGGAGACAAGCATCAGGCACCTTTCTGTGTTCACAAGAGAGAAATTCGAGTAGCAATAGAAGGGACAATGTCTCAAGAAGACTATAGAGGTAAACATCACTTAGTTGCAGCAAACAGAATGAAATTTTGCCTGGATGCTTCTCCAAAAAGAAAGCTTACTTCTAAAGAATTCAAGAGGGGTACATTTTCTCCTTGCAAGCGGGAGGCGAATCAGATGTGGGAATTAAACCCTAATGGGACCCTGGTAAATAGCTATTCCAGCCTGTGTGCAACAGTTGATTCTGCCAAAGTtattattaaattcaagttgGCCTTTCATGCAGCTGAAACTTACTCTCGTGGCGTTCGATCTTGGATTGCAAAAGGAAGAAAAGGAGAAGTCTATGTTGCTTTCTTCAATCTAAATGAGCAGAAGACGGTGATATCTGCGAAGACATCAGACCTAGCTAGGGTACTTCCTGGAAGAGACTATAATTCCTGTAAGTGCACAGAAGTGTGGAGTAAAAGGGACATAAGAGTAAGACAAGGGAGTTTCTCCATTCACATTTGCACGCACCCCAGCCGTCGTCGTCTTCTGCCTCCCACCACCGAAGCTCACCCCGTCGTCGTCTTCTCCGGTCTCCACCTCTTGCTAagTTCTTGCATTACTCGGATTCTTGGTGAATCTAAAACTGGAGATAGACCGGACGCCTCGAAGCCATAG 2055 0.4151 MECVSAAISICFLLVLYIQRGLLSKADIRVDFEMLFYNYISKAVYNRATLTMGLFESVTSKNISENAIILPRASFPPRGWNSYDSFCWTISEEEFLQSAKIISQRLHVHGYEYVVVDYLWYRRKVPGAYTDSLGFDVIDEWGRMIPDPGRWPSSKGGTGFKEVADKVHSMGLKFGIHVMRGISTQAVNANTPILDTRKGGTYQEYGKVWRAKDIAIPERACAWMPHGFMSVNTKLRAGRAFLRSLYEQYASWGVDFVKHDCVFGDDLDLSEITYVSEILSELDRPIVYSLSPGTSATPAMAKEVSGLVNMYRITGDDWDTWGDVTAHFDVTRDFSKANMIGAQGLMGNSWPDLDMLPLGWLTDPGSNEGPHRYSRLNLDEQKTQFPFITSSKKMNIHDQDLMRQMRGSKRDTPTSYTYLISLTGCTESRAVGWSIESLNQDVERICWKRNLGDKHQAPFCVHKREIRVAIEGTMSQEDYRGKHHLVAANRMKFCLDASPKRKLTSKEFKRGTFSPCKREANQMWELNPNGTLVNSYSSLCATVDSAKVIIKFKLAFHAAETYSRGVRSWIAKGRKGEVYVAFFNLNEQKTVISAKTSDLARVLPGRDYNSCKCTEVWSKRDIRVRQGSFSIHICTHPSRRRLLPPTTEAHPVVVFSGLHLLLSSCITRILGESKTGDRPDASKP 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g2976 684 Gene3D Aldolase class I 69 391 IPR013785 -
Sto3g2976 684 Gene3D - 561 644 IPR013780 -
Sto3g2976 684 ProSiteProfiles Lectin domain of ricin B chain profile. 494 572 - -
Sto3g2976 684 Pfam Alpha galactosidase C-terminal beta sandwich domain 565 636 IPR041233 -
Sto3g2976 684 SUPERFAMILY (Trans)glycosidases 73 401 IPR017853 -
Sto3g2976 684 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 48 385 IPR002241 GO:0004553|GO:0005975
Sto3g2976 684 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 525 637 IPR002241 GO:0004553|GO:0005975
Sto3g2976 684 CDD GH27 76 385 IPR002241 GO:0004553|GO:0005975
Sto3g2976 684 CDD RICIN 482 546 IPR000772 -
Sto3g2976 684 Gene3D - 460 552 - -
Sto3g2976 684 SUPERFAMILY Ricin B-like lectins 490 546 IPR035992 -
Sto3g2976 684 PANTHER ALPHA-GALACTOSIDASE 48 385 - -
Sto3g2976 684 PANTHER ALPHA-GALACTOSIDASE 525 637 - -
Sto3g2976 684 Pfam Alpha galactosidase A 247 359 IPR002241 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g2976 Sto-Chr3 34471645 34480492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g2976 73 469 Glycoside Hydrolase AT3G26380 59.955 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g2976 - - gmx:100777954 878.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g2976 3 34471645 34480492 Sto3g2976 3 34471645 34480492 CCT