Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g2970 ATGCAATCAAGGACTAAATCAGGGCTTCCATTATTAGCATCAGAGTCAGATGAAAATGCAGTGACGACACAAATCGTTGCCATTCATTCTCCTGCCGATGCAAGTTTTGATGTGAGATCTCTTCTTAAGGTTGTTCAACACATCTTTCATCCTCTCACTGATGCTTCTCTCATCCCTCCCATTCTTCAGGGGAAGCCACCACAATTAGATGCCTTGGATGACTATGCCCTCCAATCTGACATCCCTCACATTCACATGCTCCATGATTTATCTCCCACAATTAGCAAAATCTCCACCGAGCTATCATGCAAGTGTTCAGATGGAGAGGAGGCTCATGCCACAACCATGGCAATTCTTGGTATGCTTTCTTGCAATTCATGGGATTCCAAGGTGGCCATAGCACTTGCAGCTTTTGCTTTGAACTTCGGAGGCTTCTGCCTTCTCACTCATCTTCATGCCACCAACAACCCTCTTGCTAAATCAATCGCAATGTTAAAAAAACACATCATCATTATTGATGATGATATTAATATGGGACGACACAAGCATGAAGGAATCAGCAACATCATCAACACTATGTTGGATGTCACCGATCTCATTGTGGACTTCCAGAACCTTCTTCCATATGATGATGATCAAACACTACTACACTACACCACTCGTGTTCCCATTGCTGTGTATTGGATCATTCGCAGTATTGTGACTTGTGCATCGCAACTTTCAAGCTTCATGACCAGCAATTCTCACTTGTACAAACATGTAGCAGCATCATCAAAATTAGCAGAGACTTGGGAGCTTTCAAGTTTGGTTCACAAGCTCAATAACTTACAAAGCCACCTTCAAAAGCAACTCGCCCTTTGTCACAAGCATATAGATGACAGCAAGCAAACTGAAGCTTTTCAGGCACTTGTGCATCTTTTTGAGACATCTCACTTTGATAACTTGAAAATTCTCAAAGCTTTGATCAACAACAAGAACAATCCACTGCCACTTCTTGATGGTTCTACCAAGAAAAGGgTTAGCATTGACGTGCTGGGGAATAAGATTGTATTACTTTTCATATCACACCTTGATCTCTCTGATCAAGAGCTTCTAATCCTTGGAGAGATGTACCAAGAATCTCGTCATGAATCAGACATGTTTGAGATTCCATTCGAGGTTGTTTGGCTCCCAGTTGTGAACAAGACAACCGCCCCAAGGACTGAAGTGAAACAAAAAAAGTTGGAGGAGCTCCAATCTAAAATGTCATGGCACTCTGTGTGTGACCCTTGGATGTTGGAAGAAGCAGTGATTAGGTACATGAAAGAGGTGTGGCATTTCAAGAAGAAGCCTATACTTGTTGTGTTGGACCAACATGGGAATGTTGGGAACTTAAATGCATTACACATTATGTGGATTTGGGGAAGCTTGGCCTATCCTTTCACCATTGCTGTGGAAGAAGATATTTGGAAGGAACAAGTTTGGGGACTAGAGCTTCTGGCAGATATCTTTCATCCATTGCTCTTAACATGGATATCAGAAGGGAAATACATATGCTTATATGGAGGAGAAGATCTAGAATGGATTAGAAAATTCACAAAGGCCACACATGCAATGGCCAACACTCTACACATACCACTAGAGATGATTTATATGGGAAAAAGCAATCCCAGAGAGAAAATTGAGAGAAACAAGGAAGCCATAGTTTCAGAGAATCTAAGCCATACACTTGAGGATGTGACATTGATTTGGTACTTTTGGGTGAGAGTGGAAAGCATGTGGCATTCAAAATTACAGCTAGGACACACCATAGAGAGTGACCCAATGATGCAAGAAATTATGACCATTCTAAGCTTTGATCAATGTAATGAAGGATGGGCTTTAATTGGTGGAGGGACTAAAGAGAAGAACAAGATGATGGTTAAGGTAAAAGGTGAAACATTTCTCAAGTGTGTGAATGAATGTGAAGAATGGAAGGAGAAGGTGAAAGAGAAAGGGGTTTTGGGTGCAATGGATGATTGCATAAAAGGGcttcaaattcaaattccaCACCATTGCAACCACTTGATAGTGCCAGAAAGCAATGGGGAAACAACCCCAGAGAAAGTGGTATGCAGTGAATGTGGTCGTCTCATGGACAAGTTCTTCATGTATCGTTGCACTAACAATTAA 2151 0.4119 MQSRTKSGLPLLASESDENAVTTQIVAIHSPADASFDVRSLLKVVQHIFHPLTDASLIPPILQGKPPQLDALDDYALQSDIPHIHMLHDLSPTISKISTELSCKCSDGEEAHATTMAILGMLSCNSWDSKVAIALAAFALNFGGFCLLTHLHATNNPLAKSIAMLKKHIIIIDDDINMGRHKHEGISNIINTMLDVTDLIVDFQNLLPYDDDQTLLHYTTRVPIAVYWIIRSIVTCASQLSSFMTSNSHLYKHVAASSKLAETWELSSLVHKLNNLQSHLQKQLALCHKHIDDSKQTEAFQALVHLFETSHFDNLKILKALINNKNNPLPLLDGSTKKRVSIDVLGNKIVLLFISHLDLSDQELLILGEMYQESRHESDMFEIPFEVVWLPVVNKTTAPRTEVKQKKLEELQSKMSWHSVCDPWMLEEAVIRYMKEVWHFKKKPILVVLDQHGNVGNLNALHIMWIWGSLAYPFTIAVEEDIWKEQVWGLELLADIFHPLLLTWISEGKYICLYGGEDLEWIRKFTKATHAMANTLHIPLEMIYMGKSNPREKIERNKEAIVSENLSHTLEDVTLIWYFWVRVESMWHSKLQLGHTIESDPMMQEIMTILSFDQCNEGWALIGGGTKEKNKMMVKVKGETFLKCVNECEEWKEKVKEKGVLGAMDDCIKGLQIQIPHHCNHLIVPESNGETTPEKVVCSECGRLMDKFFMYRCTNN 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g2970 716 Pfam Sieve element occlusion C-terminus 479 714 IPR027944 -
Sto3g2970 716 Pfam Sieve element occlusion N-terminus 16 311 IPR027942 -
Sto3g2970 716 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 12 715 IPR039299 GO:0010088
Sto3g2970 716 PANTHER SIEVE ELEMENT OCCLUSION-RELATED 12 715 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g2970 Sto-Chr3 34416847 34427056 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g2970 - - bvg:104897214 679.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g2970 3 34416847 34427056 Sto3g2970 3 34416847 34427056 CCT