Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g2956 ATGTCTACTCATGCCATCATCTCCGGCCAACCACCGGAGTCCCTATCGGCGTCGGGTCGGAGCTCCGAGAAGCTGAGCCTGTCATCGCTGCAATCTAAAATGAAGTGCGACCCTGAAGGATACGAGACGGAGCTAGTCCTCGTCTACAGTCAATTCAATTCGTCTTTAGAACTCTTTCAGCAGCAAGCTGCCCTGAATTTCACCTCTATCAGTGGCATTGGTAGCGATCCCTCTGTAGCCAAAGACCTTGGCGATAGAGCTATGTTCTTGGCCCACGTCACTCCGTTTTATCTTAAGCAGCTTGCTGAGTTCCCCAAGAAGCTAGCAGGTTTGCTTCACTCTGCAGCGCGCACGCTTCCATCTGGCCTTCGGTATCACCTCACGCAGGCTCTCATCCTCCTCGTAAATAGAAAGATTGTTGATATTGGGGAAACGCTTCAATTGTTCATGGATCTTCAAACCCTTGGTGACAGAAAATTAAGAACGTTGGCATTTGACCATGTTGTTCATAGCATTAAGCGCATGAATCAAAAACATAAGAACGAAGCAAAGAACCGAGCACTTCAAAATGTCTTGTTTGCAATGCTACAGCAAGAGGATGAAGCAAGGGCTAAGCGATCTCTTGTCACTCTCTGTGAGCTTCATCGGAGAAGAATGTGGTTTGATGATAGAACTGCAAATGCTATCTGTACAGCTTCCTTTCATCCATCATCAAGGATCATGATAGCAGCTCTATCATTTCTTCTTGATTATGAGAAGATTGAAAATGATGAAGACAGTGATGATTCAAGCAGTGAAGATGAATCATCGGCACCAGCTCAAGTTCTTAGTAAGGAGGCAATTTACAAGGCGCACCACAAAGGTACATTGGCtagcaagaagaagaagcaagcaAAACTACAACGTGCCATGCGTAGTATGAAAAGGCAGCAACGCTTATCATCCGAAAACAGCAATACCAGCTATTATTCACCACTTAATCACCTGAAAGATGCACAGGGTTTTGCTGAGAAGCTGTTCTCTCGCCTTAAAGAATGTAATGAAAGATTTGAGGTTAAGATGATGATGCTGAAAGTGATTGCTCGAACAGTTGGACTTCATCGAttaattttactaaatttttatccttttCTTCAGAAATATGTTCAGCCGCATCAACGTGATGTCACAAATTTGCTTGCAGCAGCAGTTCAGGCTTGCCATGATATGGTTCCTCCAGATGCAGTTGAGCCCTTGTTTAAACAGATAGTAAATCATTTTGTACATGACCGCTCACGTCCAGAGGCTATTACTGTTGGATTAAATGTGGTCAGAGAGTTATGCATGCGCATGCCCTTGTTAATGACAGAAGAGTTGCTGCAAGACCTTGCATTATATAAGAAGTCACATGAGAAGGCAGTTTCTGTAGCTGCTCGATCTCTGATTGCGTTATTCAGAGAGGTTTGCCCTTCACTACTTGTTAAGAAGGACCGTGGGCGACCCAATGACCCTAAGGCAAGACCAAAGGCCTATGGAGAAGTCAATATTGCAAGTGATGTTCCTGGTGTTGAGTTGTTACAGACTATTGACAATGATGATGAGCAGGATGGTGATGATTCTGATGACTCTGAGTGCAGTGGCTCTGACAATGATCAGGAAATTGATCAGATGACCATTTCTGATGGCGATGAAGAGGACCAGCTGGGTAGTGATGATACTGGAAGTGAGGATGATGAAGCAGAAGGTAATGATGTTGGGTCAGAAGATGAACATCAAGGGCAGACTTCTGATTATGATTCTGTTCTCATTGATGACGAAGATGTTGAAGGTGAGGATGATGATCTTGAGGACAATGAAGAGGATGGTGATCAGCATACATCTAGTGATGATGATCTGCATACAtctagtgatgatgatgatctgcATTCATCTAGTGATGATAAGAAGAGTAAAACTAAAAACTCCTCAgccaagaaaagaaaattaattgattttgatGCACAACTTATTGCTGCTGATACAAGTCTCCGAGCTTTGAAGAAATTGGCTGGGGCAACAGTGGTGCATACCCCGTCAGAATCTACAGATGGAATACTTTCTAATGAGGACTTCCAAAggatcaaggaactaaagGCAAAGAAGGAAGCAAAACATGCATTGGCCCAGCATGGGTTGGCAAAGTCAGCAGCTATTAAGGTTGCAAGCCCTGATCAACTAAGTTTGAAGCGTGTGGATGCTGCCAAGCTTGAAGTTCATTTGAGGAAAAAACTAAGCAAGGAAGAAAGGTTGGCATTGGTTAGAGCAGGGAGGGAGGACAGAGGAAAATATGTGGCTCGAGCAGCTGTCAAACAGAAAAAGACGGGTGGCCTAAGCAACCGACAGAAGGAACACAAGAAGAAGATGCCTCTGGCTGCAAAGAGAGATAAGGTGTCAAAAACTCGAattgagaaaaagagaaaacagCAACGGGCTGGCAAACAGTTCCGAGGGAGGAAAGCGTGGAAATGA 2487 0.4226 MSTHAIISGQPPESLSASGRSSEKLSLSSLQSKMKCDPEGYETELVLVYSQFNSSLELFQQQAALNFTSISGIGSDPSVAKDLGDRAMFLAHVTPFYLKQLAEFPKKLAGLLHSAARTLPSGLRYHLTQALILLVNRKIVDIGETLQLFMDLQTLGDRKLRTLAFDHVVHSIKRMNQKHKNEAKNRALQNVLFAMLQQEDEARAKRSLVTLCELHRRRMWFDDRTANAICTASFHPSSRIMIAALSFLLDYEKIENDEDSDDSSSEDESSAPAQVLSKEAIYKAHHKGTLASKKKKQAKLQRAMRSMKRQQRLSSENSNTSYYSPLNHLKDAQGFAEKLFSRLKECNERFEVKMMMLKVIARTVGLHRLILLNFYPFLQKYVQPHQRDVTNLLAAAVQACHDMVPPDAVEPLFKQIVNHFVHDRSRPEAITVGLNVVRELCMRMPLLMTEELLQDLALYKKSHEKAVSVAARSLIALFREVCPSLLVKKDRGRPNDPKARPKAYGEVNIASDVPGVELLQTIDNDDEQDGDDSDDSECSGSDNDQEIDQMTISDGDEEDQLGSDDTGSEDDEAEGNDVGSEDEHQGQTSDYDSVLIDDEDVEGEDDDLEDNEEDGDQHTSSDDDLHTSSDDDDLHSSSDDKKSKTKNSSAKKRKLIDFDAQLIAADTSLRALKKLAGATVVHTPSESTDGILSNEDFQRIKELKAKKEAKHALAQHGLAKSAAIKVASPDQLSLKRVDAAKLEVHLRKKLSKEERLALVRAGREDRGKYVARAAVKQKKTGGLSNRQKEHKKKMPLAAKRDKVSKTRIEKKRKQQRAGKQFRGRKAWK 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g2956 828 PANTHER PROTEIN SDA1 HOMOLOG 22 828 - -
Sto3g2956 828 Pfam NUC130/3NT domain 89 140 IPR012977 -
Sto3g2956 828 MobiDBLite consensus disorder prediction 782 804 - -
Sto3g2956 828 MobiDBLite consensus disorder prediction 488 651 - -
Sto3g2956 828 MobiDBLite consensus disorder prediction 549 578 - -
Sto3g2956 828 MobiDBLite consensus disorder prediction 775 828 - -
Sto3g2956 828 MobiDBLite consensus disorder prediction 619 651 - -
Sto3g2956 828 MobiDBLite consensus disorder prediction 805 828 - -
Sto3g2956 828 SUPERFAMILY ARM repeat 88 486 IPR016024 -
Sto3g2956 828 Coils Coil 290 313 - -
Sto3g2956 828 MobiDBLite consensus disorder prediction 1 21 - -
Sto3g2956 828 PANTHER HSDA/SDA1-RELATED 22 828 IPR027312 GO:0000055|GO:0042273
Sto3g2956 828 MobiDBLite consensus disorder prediction 522 542 - -
Sto3g2956 828 Pfam SDA1 448 825 IPR007949 -
Sto3g2956 828 MobiDBLite consensus disorder prediction 593 618 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g2956 K14856 - gmx:100816774 1098.19