Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g2954 ATGAATCCTCTTTGCTGCATTGCTCCCGTTTCGATCGATCGGGACAGAGCCAACCCTGTGGTGCCCAAATCACCCACTCATTGCCAGTTAGGGCTAGATGCGTCTGTGAAGGCTGTCAACTGTGGTTCCAAACCCAGCTTTTCCACTTTTGATTCAGTGCTCGGTGCTGATTCCAACAAGGCGTCCTTCACTTCGAATCACGATGAGGAAGACGCGGTCAATGAAGCTACTAGAGATTCCAAGGCTTTCAGCGGCACTGTGGCTGGGATTTTGTACAAGTGGGTGAATTATGGCAAAGGTTGGAGGTCTAGGTGGTTCGTGCTTGAGGATGGGGTGCTTTCGTATTACAAGATTCATGGTCCGGATAAGATTTGGATGAGTCCGGCTAGAGAAAGGAGTGTTAGGGTGATCGGGGAGGAGTCATCTAAGTATATGAAGAAGGCAAATTGGAATCTAAATCGTCTTGGGGGCTCCACCAAGGAATGCAAACCCTTCGGTGAGATACATTTGAAGGTTTCATCAGTTCGTGCTAGCAAATCTGATGATAAGCGACTTTCTATTTTTACTGGCACAAAAACTCTACATTTGCGTTGTGTATCTAGAGAAGACAGAGCTATGTGGATTGAAGCTCTGCAGTCTGAAAAAGATCTTTTCCCTAGATCTCTAACAAGCAGCGATCTTGCAACTTCAGAAGATATTGTGGTTTCAACAGAGAAGTTACGATCCCGATTGTCACAGGAAGGCATATGTGAAGCAGTTATTAAAGACTGTGAATCACTTATGCTTTCTGAAGTGTCTTACCTTCAAGACCGGCTGAAGTTTCTTCAGCAAAAACATGTGATGTTGTTAGACACCTTAAAACAATTAGAGAGTGAGAAAATAGAGTTAGAAACTACTGTAGTGGATGAAACAAAAGAACGTGAGTCGTATTGCGGACAAGGGAATAGAAGGTTTAGTGATTTCTATTCTGTCATGTCGGAGGGCAGTGCTACTGATTCTGTAGCTGATAATGAAAGTCAAGATGGTGTAGATGTTGAAACAGATGATGAGGATGGAACATATTTTGACACAAATGAGTTCCTTTCTTCAGATGCTTTAAGAAGTGCATCCTACCGAAGTAGGGAAGGTACTGGAAATGCTTGTATATATGACAGAGATTCTTTCTTTTCTGATGGTTTGCTCGGGATTGAGAAGGGAATTAAAGATGTAAAATATCCATATGTCAAAAGAAGGGATAATTTACCAGAgccaaaagagaaagagaaacctGTTGGCTTGTGGTCAATTATTAAGGACAATATTGGCAAGGATCTTTCTGGGGTTTGTCTGCCTGTTTATTTTAATGAACCACTCTCTTCATTGCAAAAGTGCTTTGAAGATTTGGAGTATTCATACTTGGTTGATAGAGCATTGGAGTGGGGAAAGCAGGGGAATGATTTGATGAGAATTCTAAATATTGCAGCTTTTGCTGTGTCGGGCTACGCTTCTACACAAGGCCGACAGTGCAAACCCTTTAATCCTCTACTTGGGGAGACATATGAAGCTGATTATCCAGATAAAGGACTGAAGTTTTTCTCTGAAAAGGTGAGTCATCATCCAATGATTGTTGCTTGTCACTGTGAGGGAAGAGGATGGAAATTCTGGGCAGACTCCAATTTGAAAGGGAAGTTTTGGGGCCGATCTATTCAGCTAGATCCTGTCGGTGTCCTCACCCTTCAGTTCGAAGATGGTGAAACATTTCAGTGGAGCAAGGTGACCACCTCAATATACAATATCATACTAGGAAAAATTTACTGTGACCACTATGGTACCATGCGCATCAAAGGTAGTGGCAACTATTCCTGCAAGCTCAAGTTCAAAGAACAATCTATCATAGATCGAAATCCACATCAGGTCCATGGGTTTGTTCAAGACAATAGAACTGGAGAGAAGGTAGCAATGTTAATTGGGAAGTGGGATGGGGCAATGTACTATGTCCTCGGGGATCCAACTACAAAGCCTAAAGGATATGATCCAATGACAGAAGCTGTATTATTGTGGGAAAGGGACACCTATGCTACTAAGACAAGATACAACCTCTCTCCTTTTGCAATATCCTTGAATGAAATAACCCCTGGTTTATTGGAGAAGTTGCCTCCAACTGACTCAAGGCTGAGACCAGATCAAAGACATTTAGAAAATGGAGAATACGAGTTGGCAAATGCAGAGAAACTAAGACTTGAACAATTGCAGAGACAGGCAAGAAAGATGCAAGAAAGAGGGTGGCAACCCAGATGGTTTCAAAAAGATGAGGACGGTTCGTACCGATACGTGGGCGGCTATTGGGAGgcgagagagaagaaaaattgggatgAAATTCCTGATATTTTTGGTCAGTGTTTTGATTTGCCTTCATGTTCTGAAGAGCCTATATTATTCTAG 2421 0.4159 MNPLCCIAPVSIDRDRANPVVPKSPTHCQLGLDASVKAVNCGSKPSFSTFDSVLGADSNKASFTSNHDEEDAVNEATRDSKAFSGTVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKIWMSPARERSVRVIGEESSKYMKKANWNLNRLGGSTKECKPFGEIHLKVSSVRASKSDDKRLSIFTGTKTLHLRCVSREDRAMWIEALQSEKDLFPRSLTSSDLATSEDIVVSTEKLRSRLSQEGICEAVIKDCESLMLSEVSYLQDRLKFLQQKHVMLLDTLKQLESEKIELETTVVDETKERESYCGQGNRRFSDFYSVMSEGSATDSVADNESQDGVDVETDDEDGTYFDTNEFLSSDALRSASYRSREGTGNACIYDRDSFFSDGLLGIEKGIKDVKYPYVKRRDNLPEPKEKEKPVGLWSIIKDNIGKDLSGVCLPVYFNEPLSSLQKCFEDLEYSYLVDRALEWGKQGNDLMRILNIAAFAVSGYASTQGRQCKPFNPLLGETYEADYPDKGLKFFSEKVSHHPMIVACHCEGRGWKFWADSNLKGKFWGRSIQLDPVGVLTLQFEDGETFQWSKVTTSIYNIILGKIYCDHYGTMRIKGSGNYSCKLKFKEQSIIDRNPHQVHGFVQDNRTGEKVAMLIGKWDGAMYYVLGDPTTKPKGYDPMTEAVLLWERDTYATKTRYNLSPFAISLNEITPGLLEKLPPTDSRLRPDQRHLENGEYELANAEKLRLEQLQRQARKMQERGWQPRWFQKDEDGSYRYVGGYWEAREKKNWDEIPDIFGQCFDLPSCSEEPILF 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g2954 806 Gene3D - 722 790 - -
Sto3g2954 806 Pfam Oxysterol-binding protein 426 779 IPR000648 GO:0008289
Sto3g2954 806 Coils Coil 733 753 - -
Sto3g2954 806 ProSiteProfiles PH domain profile. 84 216 IPR001849 -
Sto3g2954 806 Coils Coil 272 306 - -
Sto3g2954 806 MobiDBLite consensus disorder prediction 329 349 - -
Sto3g2954 806 Gene3D - 511 678 - -
Sto3g2954 806 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 2 794 IPR000648 GO:0008289
Sto3g2954 806 SMART PH_update 85 218 IPR001849 -
Sto3g2954 806 Pfam Pleckstrin homology domain 89 213 - -
Sto3g2954 806 SUPERFAMILY Oxysterol-binding protein-like 420 794 IPR037239 -
Sto3g2954 806 SUPERFAMILY PH domain-like 86 213 - -
Sto3g2954 806 Gene3D - 83 217 IPR011993 -
Sto3g2954 806 CDD PH_ORP_plant 87 220 - -
Sto3g2954 806 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 1D 2 794 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g2954 Sto-Chr3 34230169 34235681 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g2954 K20456 - gmx:100788779 1434.08