Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g2947 atgGAATGCTGTATAATAGCTAAGCTCAAAACCCAGCCTCTCTGGTTCTCCCTCCTCTTCGCTTTGGGTTTCCTCTCCTTTCTCAAACTCTCCCTCTCTTTCCTCAAATGGGTATACGCCAATTTCCTCCGAGCCCCCAAGAATCTCAAGCAATACGGATCCTGGGCCCTCGTCACCGGCCCCACGGACGGCATAGGCAAGGGTTTCGCCTTCGAGTTGGCTCGGAAGGGGCTGAATCTGGTCCTGGTGGGTCGGAATCCGGAGAAACTCAGGGATGTCTCCGACGAGATCGTAGCCAAGTTCGGGAAAACCCAGATCAAGAACGTGGTCGTTGATTTCAGCGGCGATCTCTCCGAAGGGATGGAGAGGATTCGCGAGGCAATTGAAGGGTTGGAGGTTGGGGTTTTGATCAACAATGTGGGGATTTCGTACCCTTACGCGAGATTCTTCCATGAAGTGGATGAGGAGTTGTTGGGGGATCTGATTAAGGTGAATGTGGAAGGGACTAGTAGGGTTACGAAAATGGTGCTTCCTGGGATGattgggaggaagaagggggcGATTGTGAATATTGGGTCTGGAGCCGCCATTGTCATTCCTTCCGATCCCCTTTATGCTGTATATGCTGCCTCAAAAGCGTACATAGATCAGTTTTCAAGATGTCTCTATGTTGAATACAAGAAAAGTGGGATTGACGTGCAGTGTCAgGTTCCACTCTATGTGGCAACGAAGATGGCATCCATAAAGAGATCATCATTGTTTGTGCCTTCAAATGAAGGGTATGCCAAAGCAGGAGTGAGGTGGATCGGATACGAGCCACGTTGCACGCCTTATTGGGTCCATTCCATTATTTGGGCCTTGGCCCATTCCTTGCCTGAGTCCCTTGTTGATTGTTGGCGTTTGGGCTTTTGTCTTGGCATTCGCAAGAGAGGGCAGCTTAAGGACTCAAGGAAGAAGGACTAG 963 0.4881 MECCIIAKLKTQPLWFSLLFALGFLSFLKLSLSFLKWVYANFLRAPKNLKQYGSWALVTGPTDGIGKGFAFELARKGLNLVLVGRNPEKLRDVSDEIVAKFGKTQIKNVVVDFSGDLSEGMERIREAIEGLEVGVLINNVGISYPYARFFHEVDEELLGDLIKVNVEGTSRVTKMVLPGMIGRKKGAIVNIGSGAAIVIPSDPLYAVYAASKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIKRSSLFVPSNEGYAKAGVRWIGYEPRCTPYWVHSIIWALAHSLPESLVDCWRLGFCLGIRKRGQLKDSRKKD 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g2947 320 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 142 IPR002347 -
Sto3g2947 320 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 186 194 IPR002347 -
Sto3g2947 320 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 208 227 IPR002347 -
Sto3g2947 320 PANTHER BETA-KETOACYL REDUCTASE 1-RELATED 5 319 - -
Sto3g2947 320 Gene3D - 48 270 - -
Sto3g2947 320 PIRSF 11-beta-HSD1 5 314 - -
Sto3g2947 320 PRINTS Glucose/ribitol dehydrogenase family signature 55 72 IPR002347 -
Sto3g2947 320 PRINTS Glucose/ribitol dehydrogenase family signature 131 142 IPR002347 -
Sto3g2947 320 PRINTS Glucose/ribitol dehydrogenase family signature 180 196 IPR002347 -
Sto3g2947 320 PRINTS Glucose/ribitol dehydrogenase family signature 208 227 IPR002347 -
Sto3g2947 320 PRINTS Glucose/ribitol dehydrogenase family signature 229 246 IPR002347 -
Sto3g2947 320 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 53 288 IPR036291 -
Sto3g2947 320 Pfam short chain dehydrogenase 55 249 IPR002347 -
Sto3g2947 320 PANTHER RH59310P 5 319 - -
Sto3g2947 320 CDD 17beta-HSD1_like_SDR_c 53 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g2947 Sto-Chr3 34149451 34152864 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g2947 1 320 Lipid Metabolism Gene Families AT1G67730 61.562 1.87e-154 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g2947 K10251 - csin:114316241 531.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g2947 3 34149451 34152864 Sto3g2947 3 34149451 34152864 CCT