Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g2909 ATGCTTCCTTCGTACTTCCCTCTTCGTTGGGAGAGCACAGGAGACCAATGGTGGTACGCGTCTCCGATCGATTGGGCGGCGGCGAATGGGCTCTACGATCTCGTCGCCGAGCTTCTCCACCTCGACACCAATCTCCTCATCAAGCTCTCCTCCCTCCGTCGAATCCGCCGCCTCGAGACCGTGTGGGACGATGAGTCCCAATTCCACGACGTCGCCAAATGCCGCTCCCGCGTCGCGAGGAGTCTCCTCGCCGAGTGCGAGTCGGGGAGGAGAGGAGGGCATAGCGGTAATTCCCTCATTCGCGCCGGCTACGGCGGGTGGCTTCTCTACACCGCCGCGTCCGCCGGAGATGTGGATTTCGTTCGGGATCTGTTGGGGAGGGAGCCGCTTCTGGTGTTCGGAGAAGGAGAGTATGGAGTCACCGATGTACTGTATGCTGCCGCGAGAAGCAAGAACTGTGAGGTCTTCGAGATTCTTCTTGATTCGGCACTTTCGCCCAAAGATGGCCGAGTCGCTGAAGCGAGGGATATGATGAATAGGGCCATTCATGCTGCTGCGAGAGGAGGGAATTGGGAGATACTGAAGCAGCTTCTTGGAAGTGCTTCTGACATTTTAGCTTATAGAGATTCCGAAGGATCCACTGTTTTGCACTCAGCAGCGGGCAGAGGGCAGGTTGAGGTGGTGAAAAATTTAGTAGACTCATCTGAAATTATCAGCTCAACAGATGCAGAAGGGAACACAGCCTTACACGTGGCTTCTTACAGGGGTTATTTGCCTGTGGTAGAGATCCTGATTCTTGCGTCTCCCTCATTGTCTTTGTTAACCAATCACTATGGAGACACTTTTCTTCATATGGCAGTGTCAGGTTTCAGAAGCCCGGGTTTCCGAAGACTGGATAAGCATAGTGAGTTAATGAAGCAAGTGCTAAGTGGGAAGATTGTGAACATGCAGGACATTATCAATATCAGGAACAACGACGGAAGAACGGCTCTTCATGTGGCTGTGATTGACAATATCCAGTGTGACATAGTGGAATTGTTAATGTCTGTCCCTTCGATTGATTTGAACATTCGTGATGCCGACGGGATGACCCCTTTGGATCTTCTGAAGCAAAGGCCACAATCGGCATCTTCTGAGATTCTGATCAAACAGTTGATTTCAGCCGGAGGAATATCCAATAATCATCCTGATTACATGGCAAAAAGACATACCCTTCTTTCCCATCTCAAAACCCATGGCATTGGAAGGAGTCCTGGTACGTCTTTTAGAATACCAGATGCAGAGATATTTCTATACACAGGCATGGAAAACGCATCATCCGATACCAAGTATTATGATCAGGCAAGTGTAAAATCCAATTCCTGCTCAGGCGAACTCTGCAATTCTGAGCCAGTTATCAGCTCTCCTTATAACATCAAGTCAGGTTCTGTTAAATGTGCTACCAGGCGCTTGAAGTTTTTTCTGCGGTGGcctaagaagaaagaaagagaagtagtagCTGCCTCAAAGCAAgatgatgattcGCAATATTCTTTCAGTTCAAGTAAAATTGTGGAAGACTTTCCGATCCCATTACGGCAGAAGTACTCAAAAATGTCCTCTCTTCCAAACAACAAAAGAACACTATCCATTAGGACCATTCTTCCTAGTCCATCCACAAAAGAGAAATTTACCGCAGGCCTAATGCAAGGCGTACTTCAGGTAAAGCCAAATTTGGCTCCTCCTGGTCCTTTTTTAAAATCATCTGTGGCTTCACTTTCCTCCATCAATAAACAAAAGGGTCTCAATTCCATGGGACCCTCTGGCTCTAATGGATCAACAGATAATGAAGGTACTACACTACAACTCAACTTTAGACAGGGTTCCTtccataaaaagaaaatcatgaatCGTTTTCTGTCTTTTGGAGCACAAGGCCTAGCTGTGGAAGATTCAAATAGCTATACAATGTCAAACCGTAGTTACAAGCATTTCAGTTCTTTAGTTGCGTAG 1992 0.4634 MLPSYFPLRWESTGDQWWYASPIDWAAANGLYDLVAELLHLDTNLLIKLSSLRRIRRLETVWDDESQFHDVAKCRSRVARSLLAECESGRRGGHSGNSLIRAGYGGWLLYTAASAGDVDFVRDLLGREPLLVFGEGEYGVTDVLYAAARSKNCEVFEILLDSALSPKDGRVAEARDMMNRAIHAAARGGNWEILKQLLGSASDILAYRDSEGSTVLHSAAGRGQVEVVKNLVDSSEIISSTDAEGNTALHVASYRGYLPVVEILILASPSLSLLTNHYGDTFLHMAVSGFRSPGFRRLDKHSELMKQVLSGKIVNMQDIINIRNNDGRTALHVAVIDNIQCDIVELLMSVPSIDLNIRDADGMTPLDLLKQRPQSASSEILIKQLISAGGISNNHPDYMAKRHTLLSHLKTHGIGRSPGTSFRIPDAEIFLYTGMENASSDTKYYDQASVKSNSCSGELCNSEPVISSPYNIKSGSVKCATRRLKFFLRWPKKKEREVVAASKQDDDSQYSFSSSKIVEDFPIPLRQKYSKMSSLPNNKRTLSIRTILPSPSTKEKFTAGLMQGVLQVKPNLAPPGPFLKSSVASLSSINKQKGLNSMGPSGSNGSTDNEGTTLQLNFRQGSFHKKKIMNRFLSFGAQGLAVEDSNSYTMSNRSYKHFSSLVA 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g2909 663 Pfam Ankyrin repeat 326 359 IPR002110 GO:0005515
Sto3g2909 663 PANTHER ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED 1 659 - -
Sto3g2909 663 SMART ANK_2a 326 357 IPR002110 GO:0005515
Sto3g2909 663 SMART ANK_2a 361 394 IPR002110 GO:0005515
Sto3g2909 663 SMART ANK_2a 104 133 IPR002110 GO:0005515
Sto3g2909 663 SMART ANK_2a 18 47 IPR002110 GO:0005515
Sto3g2909 663 SMART ANK_2a 244 273 IPR002110 GO:0005515
Sto3g2909 663 SMART ANK_2a 177 206 IPR002110 GO:0005515
Sto3g2909 663 SMART ANK_2a 211 240 IPR002110 GO:0005515
Sto3g2909 663 SMART ANK_2a 138 168 IPR002110 GO:0005515
Sto3g2909 663 SMART ANK_2a 278 318 IPR002110 GO:0005515
Sto3g2909 663 ProSiteProfiles Ankyrin repeat profile. 244 276 IPR002110 GO:0005515
Sto3g2909 663 ProSiteProfiles Ankyrin repeat region circular profile. 244 265 - -
Sto3g2909 663 Pfam Ankyrin repeats (3 copies) 182 265 IPR002110 GO:0005515
Sto3g2909 663 ProSiteProfiles Ankyrin repeat region circular profile. 211 242 - -
Sto3g2909 663 Gene3D - 12 412 IPR036770 -
Sto3g2909 663 MobiDBLite consensus disorder prediction 592 613 - -
Sto3g2909 663 ProSiteProfiles Ankyrin repeat profile. 211 243 IPR002110 GO:0005515
Sto3g2909 663 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 1 659 - -
Sto3g2909 663 SUPERFAMILY Ankyrin repeat 108 382 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g2909 Sto-Chr3 33769897 33772883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g2909 108 367 Miscellaneous Gene Families AT1G07710 30.970 2.80e-19 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g2909 - - gmx:100791999 856.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g2909 3 33769897 33772883 Sto3g2909 3 33769897 33772883 ECH