Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g2861 ATGAAACTGGTTCCGAGAGAGGTCGATAAGCTAGCCCTGCACAATGCTGGCTTCCTTGCCCAAAAACGTCTTGCTCGTGGTTTAAGACTCAATTATACTGAAGCTGTTGCTCTCATAGCCACACAGATTTTAGAATTCGTTCGTGATGGGGACAAGAGTGTTGCTGAATTGATGGACATTGGGAAACAACTCTTAGGGAGGAGACAAGTTCTTCCAGCCGTTCCACATCTCTTGGATGCTGTAGAGGTTGAAGCTACCTTCCCTGATGGGACTAAGTTAGTCACTGTTCATAATGCAATTGCTTCTGAGGATGGTAACCTAGAACTAGCATTGCATGGTTCATTTCTTCCAGTACCTTCACTTGACAAGTTTCCCACAATAGAAGATAACAGAATACCCGGTGAAATAATTTTTGGCGGTGGAAACCTGATTCTTAACCGGGGAAGGAAAGCAGTAATTCTCAGAGTTGTCAACATTGGAGACAGGCCAATTCAGGTTGGCAGCCACTATCACTTCATTGAAGTGAATCCCTTCTTAGTATTTGATCGAAGGAAAGCATATGGCATGCGTCTCAATATAGCTGCAGGGACTGCAACACGCTTTGAGCCAGGGGAAAGGAAGAGCGTTGTACTTGTAAGCATTGGAGGTAACAAATTCGTCAGAGGTGGTAATGGCATTGCTGATGGCCCGGTTAATGATTCCAATTGCAGGCTAGCCATGGACTGTGTAAGCAGATGGAAATTTGGACACATGGAAGAGGAAAATACaagTGAAGGCATTACTGGAGAAGCCTCTTCTTTCACCACAATAATTTCTCGTGAGAAATATTGTAACATGTATGGCCCCACTGCTGGTGATAAAATTCGTCTTGGTGACACGGACTTGTTTGCTGAAATTGAAAAAGATTTTTCCGTCTGTGGTGATGAATGTGTTTTTGGAGGTGGAAAAGTTATAAGAGATGGAATGGATATTGGAATTAAAGAAGGCTGTATTGTATTCATTGGAAAATCAGGAAATCCAGACATCATGGATGGTGCATGTTCTACTATGGTTGTTGGTGCCTGCACTGAAGTTATAGCTGGAGAAGGTTTAATTGTAACAGCTGGGGCCATAGATTGTCATGTGCATTTTATATGCCCTCAATTAGTATACGAAGCAATATCAAGTGGCATCACAACATTAGTGGGAGGTGGAACAGGACCAGCTGATGGAACTCGCGCTACAACTTGCACACCAGCACCAATTCAGATGAAACTAATGCTGCAATCAACAGATCACCTGCCATTGAACTTTGGTTTTACTGGCAAAGGCAATTGTTCCAAGTTTgaagaagtagaaaaaataaTCAAGGCTGGAGCTATGGGACTGAAGCTGCATGAGGACTGGGGAACCCACCCTGCTGCAATAGACAATTGTTTGACAGTTGCAGAACAACATGACGTCCAGGTTAATATACATACCGACACATTAAATGAATCTGGATTTGTGGAACATACAATTGCTGCATTTAAAGGAAGAACAATTCACACTTACCACAGTGAAGGTGCAGGTGGTGGCCATGCCCCTGATATCATCAAAGTATGTGGTGTGAAGAATGTCCTGCCCTCATCAACCAACCCCACAAGACCTTATACATATAATACAATAGATGAACATCTTGACATGTtgATAGTCTGCCATCACCTTGATAAGAACATTCCAGAAGATGTCGCATTTGCTGAATCAAGGATAAGAGCTGAAACAATTGCTGCTGAAGATATTTTGCATGATATGGGGGCCATTAGCATTATATCTTCCGATTCACAGGCTATGGGGCGAATTGGAGAGGTGATATGTAGAACTTGGCAGACTGCCAATAAGATGAAGTCGCAAAGAGGACCGCTTCAGCCTGATGGTACAGACAATGACAACTTTCGAATCAAACGATATATTGCAAAATACACTATAAATCCAGCTATAGCAAACGGGTTCTCAGAATTTGTTGGTTCAGTTGAGGTTGGGAAGTTAGCAGATCTTGTGCTATGGAAGCCATCATTTTTTGGGGCGAAACCAGAAATGGTCATCAAAGGTGGTGACATTGCATGGGCTAACATGGGCGATCCAAATGCTAGCATCCCGACACCTGAGCCGGTGATTATGAGGCCTATGTTCGGTGCATATGGCAAGGCGGGTAGTGATAACTCCATTGCTTTTGTGAGCAAGGCAGCATTAGCGAATGGAGTAAAAGCTTCGTACGGACTGAGCAAGAGGGTGGAAGCGGTGGGGAATGTGAGGAAGCTCACCAAACTAGACATGAAACTAAATGACGCCCTTCCAAATATCACTGTGGACCCTGAAACTTACACTGTTACTGCTGATGATGAAGTTCTTACCTGCCCTGCAGCCACTACCGTCCCCCTCTCTCGCAATTACTTCCTCTTTTAA 2424 0.434 MKLVPREVDKLALHNAGFLAQKRLARGLRLNYTEAVALIATQILEFVRDGDKSVAELMDIGKQLLGRRQVLPAVPHLLDAVEVEATFPDGTKLVTVHNAIASEDGNLELALHGSFLPVPSLDKFPTIEDNRIPGEIIFGGGNLILNRGRKAVILRVVNIGDRPIQVGSHYHFIEVNPFLVFDRRKAYGMRLNIAAGTATRFEPGERKSVVLVSIGGNKFVRGGNGIADGPVNDSNCRLAMDCVSRWKFGHMEEENTSEGITGEASSFTTIISREKYCNMYGPTAGDKIRLGDTDLFAEIEKDFSVCGDECVFGGGKVIRDGMDIGIKEGCIVFIGKSGNPDIMDGACSTMVVGACTEVIAGEGLIVTAGAIDCHVHFICPQLVYEAISSGITTLVGGGTGPADGTRATTCTPAPIQMKLMLQSTDHLPLNFGFTGKGNCSKFEEVEKIIKAGAMGLKLHEDWGTHPAAIDNCLTVAEQHDVQVNIHTDTLNESGFVEHTIAAFKGRTIHTYHSEGAGGGHAPDIIKVCGVKNVLPSSTNPTRPYTYNTIDEHLDMLIVCHHLDKNIPEDVAFAESRIRAETIAAEDILHDMGAISIISSDSQAMGRIGEVICRTWQTANKMKSQRGPLQPDGTDNDNFRIKRYIAKYTINPAIANGFSEFVGSVEVGKLADLVLWKPSFFGAKPEMVIKGGDIAWANMGDPNASIPTPEPVIMRPMFGAYGKAGSDNSIAFVSKAALANGVKASYGLSKRVEAVGNVRKLTKLDMKLNDALPNITVDPETYTVTADDEVLTCPAATTVPLSRNYFLF 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g2861 807 Pfam Urease subunit beta-alpha linker domain 231 263 IPR040881 -
Sto3g2861 807 SUPERFAMILY Metallo-dependent hydrolases 370 807 IPR032466 -
Sto3g2861 807 CDD Urease_gamma 5 100 IPR002026 GO:0016151|GO:0043419
Sto3g2861 807 Hamap Urease subunit alpha [ureC]. 269 807 IPR005848 GO:0006807|GO:0009039|GO:0016151
Sto3g2861 807 CDD Urease_beta 132 231 IPR002019 GO:0035550|GO:0043419
Sto3g2861 807 SUPERFAMILY Composite domain of metallo-dependent hydrolases 649 719 IPR011059 GO:0016810
Sto3g2861 807 Gene3D Urease, beta subunit 131 260 IPR036461 -
Sto3g2861 807 SUPERFAMILY Composite domain of metallo-dependent hydrolases 271 417 IPR011059 GO:0016810
Sto3g2861 807 Gene3D Urease, subunit C, domain 1 323 720 IPR011059 GO:0016810
Sto3g2861 807 Pfam Urease, gamma subunit 1 100 IPR002026 GO:0016151|GO:0043419
Sto3g2861 807 CDD Urease_alpha 271 806 IPR005848 GO:0006807|GO:0009039|GO:0016151
Sto3g2861 807 TIGRFAM urease_alph: urease, alpha subunit 323 807 IPR005848 GO:0006807|GO:0009039|GO:0016151
Sto3g2861 807 ProSitePatterns Urease nickel ligands signature. 367 380 IPR029754 GO:0016151
Sto3g2861 807 Gene3D Urease, subunit C, domain 1 261 322 IPR011059 GO:0016810
Sto3g2861 807 Pfam Amidohydrolase family 365 690 IPR006680 GO:0016787
Sto3g2861 807 ProSitePatterns Urease active site. 557 573 IPR017950 GO:0009039
Sto3g2861 807 Pfam Urease beta subunit 133 229 IPR002019 GO:0035550|GO:0043419
Sto3g2861 807 Gene3D - 369 807 - -
Sto3g2861 807 Gene3D - 4 124 IPR036463 GO:0016151|GO:0043419
Sto3g2861 807 SUPERFAMILY Urease, beta-subunit 132 260 IPR036461 -
Sto3g2861 807 TIGRFAM urease_gam: urease, gamma subunit 1 102 IPR002026 GO:0016151|GO:0043419
Sto3g2861 807 Pfam Urease alpha-subunit, N-terminal domain 323 359 IPR011612 -
Sto3g2861 807 Pfam Urease alpha-subunit, N-terminal domain 271 322 IPR011612 -
Sto3g2861 807 PRINTS Urea amidohydrolase (urease) protein signature 535 552 IPR005848 GO:0006807|GO:0009039|GO:0016151
Sto3g2861 807 PRINTS Urea amidohydrolase (urease) protein signature 574 590 IPR005848 GO:0006807|GO:0009039|GO:0016151
Sto3g2861 807 PRINTS Urea amidohydrolase (urease) protein signature 641 656 IPR005848 GO:0006807|GO:0009039|GO:0016151
Sto3g2861 807 PRINTS Urea amidohydrolase (urease) protein signature 667 680 IPR005848 GO:0006807|GO:0009039|GO:0016151
Sto3g2861 807 TIGRFAM urease_beta: urease, beta subunit 132 232 IPR002019 GO:0035550|GO:0043419
Sto3g2861 807 PANTHER UREASE 323 807 - -
Sto3g2861 807 PANTHER UREASE 1 322 - -
Sto3g2861 807 PIRSF Urease 1 323 IPR008221 GO:0006807|GO:0009039|GO:0016151
Sto3g2861 807 PIRSF Urease 322 807 IPR008221 GO:0006807|GO:0009039|GO:0016151
Sto3g2861 807 ProSiteProfiles Urease domain profile. 369 807 IPR017951 GO:0006807|GO:0009039|GO:0016151
Sto3g2861 807 SUPERFAMILY Urease, gamma-subunit 1 105 IPR036463 GO:0016151|GO:0043419
Sto3g2861 807 Hamap Urease subunit beta [ureB]. 131 231 IPR002019 GO:0035550|GO:0043419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g2861 K01427 - qsu:112022271 1354.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g2861 3 33227539 33243784 Sto3g2861 3 33227539 33243784 ECH