Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g2529 ATGAGTTCCATTTCAAAGCTTTCCAATCCAAATCCGGCTGCTTCCTTGTCATCTAAACTCAGGTCCGGTACCAGATCTTCTCAGTCTCAACTCAAGTGCTTAATCGGCTTCCCTACTCTCACCACTTTCAATACCAACCTTGCTACTTCCACATCCTCCATGCGAACCCATCTGCCTCAGTTTTCAAGGGGCTCTTTGATGTGCTCTCAAACTGATGGAAATGGAAGTCCTGCAAAGAGGACAGTGCTTCATGATCTCTATGAGAAAGAAGGCCAGAGTCCATGGTATGATAACCTGTGCCGACCTGTTACAGATCTCCTTCCTCTGATAGCAAGTGGTGTTAGAGGCGTGACTAGCAATCCTGCgATTTTCCAGAAAGCAATCTCATCGTCAAATGCTTACAATGATCAATTCAAGCAGCTTGTGCAAGAAGGGAAAGATATTGAGACTGCATATTGGGAACTTGTGGTGAAGGACATTCAAGATGCATGCAAATTATTTGAACCAATTTATGACCAAACTGATGGTGGTGATGGTTATGTTTCTGTTGAAGTATCTCCTAGGCTTGCTGATGATACTGAAGGGACCATAGAGGCTGCAAAATGGCTTCATAAAGTGGTTGCTCGCCCCAATGTGTACATAAAGATCCCTGCTACTGCGGCATGTATCCCTTCAATTAAGGAAGTTATTGCAAATGGAATAAGTGTCAATGTGACTctcatattctctctcgcAAGATATGAAGCAGTAATTGACGCTTACTTGGATGGTCTTGAGGCTTCTGGGCTAAACGACCTCTCCAAAGTCACGAGTGTTGCCTCTTTCTTTGTCAGCCGAGTTGACACTCTCATTGACAAGATGCTTGAGAAGATTGGCACCCCGGAGGCCCTTGATCTGCGTGGAAAGGCGGCTGTAGCTCAAGCAGCCTTGGCATACGAGCTCTACCAGAAGAAATTCTCTGGTCCAAGGTGGGAGGCCCTTGTTAAGAAAGGTGCCAAGAAGCAGAGACTGCTCTGGGCCTCAACCAGCGTCAAGAATCCAGCCTACCCTGACACCTTATATGTGGCTCCTCTCATTGGACCCGACACTGTATCGACCATGCCGGACCAAGCACTCCAAGCATTTATCGATCATGGTACTGTATCCAGGACGATTGATTCAAATATATCTGAAGCTAAAGGGGTATACAATGCTCTGGAGAAATTGGGAATTGACTGGAGCTTCGTTGGCAACCAGCTTGAACTTGAAGGAGTGGAATCTTTTAAGAAGAGCTTTGACAGCCTCCTCGATACCCTGCAAGAGAAGGCAAACTCACTCAGATTAGTAAGCCTGTGA 1335 0.4539 MSSISKLSNPNPAASLSSKLRSGTRSSQSQLKCLIGFPTLTTFNTNLATSTSSMRTHLPQFSRGSLMCSQTDGNGSPAKRTVLHDLYEKEGQSPWYDNLCRPVTDLLPLIASGVRGVTSNPAIFQKAISSSNAYNDQFKQLVQEGKDIETAYWELVVKDIQDACKLFEPIYDQTDGGDGYVSVEVSPRLADDTEGTIEAAKWLHKVVARPNVYIKIPATAACIPSIKEVIANGISVNVTLIFSLARYEAVIDAYLDGLEASGLNDLSKVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGKAAVAQAALAYELYQKKFSGPRWEALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFIDHGTVSRTIDSNISEAKGVYNALEKLGIDWSFVGNQLELEGVESFKKSFDSLLDTLQEKANSLRLVSL 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g2529 444 Gene3D Aldolase class I 81 436 IPR013785 -
Sto3g2529 444 TIGRFAM tal_mycobact: transaldolase 93 430 IPR004732 GO:0004801|GO:0005737|GO:0006098
Sto3g2529 444 PIRSF Trnald_Bac_Plnt 72 444 IPR004732 GO:0004801|GO:0005737|GO:0006098
Sto3g2529 444 SUPERFAMILY Aldolase 89 435 - -
Sto3g2529 444 MobiDBLite consensus disorder prediction 1 22 - -
Sto3g2529 444 PANTHER TRANSALDOLASE 1 443 IPR001585 GO:0005975
Sto3g2529 444 ProSitePatterns Transaldolase signature 1. 116 124 IPR018225 GO:0005975
Sto3g2529 444 Pfam Transaldolase/Fructose-6-phosphate aldolase 109 431 IPR001585 GO:0005975
Sto3g2529 444 PANTHER BNAA08G02750D PROTEIN 1 443 - -
Sto3g2529 444 CDD Transaldolase_like 93 427 IPR004732 GO:0004801|GO:0005737|GO:0006098
Sto3g2529 444 Hamap Transaldolase [tal]. 83 442 IPR004732 GO:0004801|GO:0005737|GO:0006098
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g2529 Sto-Chr3 29396224 29399770 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g2529 K00616 - cpap:110816386 733.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g2529 3 29396224 29399770 Sto3g2529 3 29396224 29399770 ECH