Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g2525 atgacgaactacgtggactttgatccctcccgaaggTTGCTGGTTCGACGCCGCTCACAATTGGCACTGCAATCTTTGACCATGGACGCCGTTGAGCAATCACTTCGCAAAGCCTTAGCTGAAAAGCAGTCCGCCGTCGAAACGCAGGGAAATGCGGTCCGTGCTCTCAAAGCCGCCGCCACCCCCGCGTCCAAGCCGGAAATTGATGCTGCCATTGCAACCCTCAACAATTTGAAGCTGGAGAAGTCTTCCATTGAGAAGCAGCTCCAAGCACACATCACTGACGCCGGTGGTGACGGTTCCTTCAGTAAGGAAGCATTCCGTCAAGCCGTAGTTAACACTCTCGAGCGCCGATTATTTTACATTCCCTCCTTTAAGATTTACAGAGGTGTTGCTGGGCTTTACGATTATGGGCCACCTGGTTGTTCCGTTAAGTCCAATGTCCTTAGCTTCTGGCGTCAGCATTTTGTTCTTGAGGAGAACATGTTGGAGGTTGACTGCCCATGTGTGACACCTGAAGTTGTCCTCAAGGCATCAGGTCATGTGGACAAATTCACTGATCTCATGGTTAAGGATGAGAAAACTGGAACATGTTACCGAGCTGACCACTTGCTCAAGGACTTCTGCAATGAAAAGCTACAGAAAGATCTGAGCATAGCACCAGAAAAAGCTGCTGAGCTTAAGCATGTATTAGCAACtttggatgatttctcttctgaaGAGTTGGGTGCAAAGATCAAGGAGTATGGAATTACAGCTCCAGACACAAAGAATTCACTCTCTGACCCTTATCCATTCAATTTAATGTTCCAGACATCAATAGGCCCGTCTGGCTTGAGTCCTGGGTATATGCGCCCTGAAACTGCACAAGGCATCTTTGTTAATTTCAAAGACTTGTACTATTATAATGGAAACAAACTCCCATTTGCTGCAGCCCAAATTGGGCAGGCATTTAGAAATGAGATATCTCCTCGCCAAGGCCTTCTTAGAGTTCGTGAATTCACATTGGCCGAAATTGAGCACTTTGTTGATCCAGATGACAAGTCTCATCCAAAATACTCAGAAGTTGCAAACTTGGAGTTTTTGATGTTCCCAAGGGACGAGCAAATGTCTGGTCAATCTGCTAAGAAAATTGTTCTCGGTGATGCTGTTTCAAGGGGAATTGTTAACAATGAGACTCTTGGTTACTTCATCGGTCGAGTATATCTTTTCTTAACTCGTCTTGGTATAGATAAAGAGCGTTTACGATTCAGGCAACACCTTGCTAATGAGATGGCCCATTATGCTTGTGATTGTTGGGATGCTGAGATTGAGTGTTCTTATGGTTGGATTGAGTGCGTTGGCATTGCAGATAGATCTGCATATGATTTGCGTGCTCACTCGGAGAAGAGTGGTGTTCCCTTAGTAGCTCATGAAAAATTTTCAGAACCTAAGGAAGTGGAGAAATTGGTTATAGCTCCAGTAAAGAAAGAGTTAGGTCTGGCATTCAAGGGGAACCAGAAGATGGTGGTTGAATCACTTGAGGCAATGGGTGAGAAGGAAGCTTTGGACATGAAGGCAGCTCTAGAATCAAAAGGGGAAGTGGACTTTTATGTCTGTACTCTTGGGAAAAATGTGGCTATTAAGAAGAATATGGTCGCTATTTCcaaggagaaaaaaaaggaacacCAGAGAGTTTTTACACCATCTGTTATTGAACCATCCTTTGGAATTGGACGGATAATTTATTGCCTGTTTGAGCACTCTTTCTACATGAGGCCAAGTAAAGCTGGGGATGAGCAATTGAATGTATTCCGCTTTCCCCCCATTGTAGCACCTATTAAATGCACAGTTTTTCCACTAGTTCAGAACCAGCAATATGAGGAGATTTCTAAATTAATTTCCAAGTCATTGACAGCAGCTGGAATTTCGCATAAGATTGACATGACAGGTACATCAATAGGAAAGCGGTATGCAAGAACAGATGAACTTGGTGTACCTTTTGCTATCACTGTAGATTCAGCAACCTCGGTGACTATTCGGGAGAGGGACAGTAAACATCAAGTGCGTGTGAGTGTGGAAGAAGCTGCCTCAGTCGTTAAGGATGTAACTGAAGGCCATAGGACATGGGCAGATGTGTGGTCCACATTTCCTCATCATTCCTCCGCTTCCGCGGATGAGTGA 2163 0.4313 MTNYVDFDPSRRLLVRRRSQLALQSLTMDAVEQSLRKALAEKQSAVETQGNAVRALKAAATPASKPEIDAAIATLNNLKLEKSSIEKQLQAHITDAGGDGSFSKEAFRQAVVNTLERRLFYIPSFKIYRGVAGLYDYGPPGCSVKSNVLSFWRQHFVLEENMLEVDCPCVTPEVVLKASGHVDKFTDLMVKDEKTGTCYRADHLLKDFCNEKLQKDLSIAPEKAAELKHVLATLDDFSSEELGAKIKEYGITAPDTKNSLSDPYPFNLMFQTSIGPSGLSPGYMRPETAQGIFVNFKDLYYYNGNKLPFAAAQIGQAFRNEISPRQGLLRVREFTLAEIEHFVDPDDKSHPKYSEVANLEFLMFPRDEQMSGQSAKKIVLGDAVSRGIVNNETLGYFIGRVYLFLTRLGIDKERLRFRQHLANEMAHYACDCWDAEIECSYGWIECVGIADRSAYDLRAHSEKSGVPLVAHEKFSEPKEVEKLVIAPVKKELGLAFKGNQKMVVESLEAMGEKEALDMKAALESKGEVDFYVCTLGKNVAIKKNMVAISKEKKKEHQRVFTPSVIEPSFGIGRIIYCLFEHSFYMRPSKAGDEQLNVFRFPPIVAPIKCTVFPLVQNQQYEEISKLISKSLTAAGISHKIDMTGTSIGKRYARTDELGVPFAITVDSATSVTIRERDSKHQVRVSVEEAASVVKDVTEGHRTWADVWSTFPHHSSASADE 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g2525 720 Gene3D - 43 93 - -
Sto3g2525 720 SUPERFAMILY Class II aaRS ABD-related 596 712 - -
Sto3g2525 720 Coils Coil 68 95 - -
Sto3g2525 720 Pfam Anticodon binding domain 608 694 IPR004154 -
Sto3g2525 720 Gene3D - 485 553 - -
Sto3g2525 720 Coils Coil 28 48 - -
Sto3g2525 720 CDD GlyRS-like_core 111 457 IPR033731 -
Sto3g2525 720 PRINTS Glycyl-tRNA synthetase signature 127 141 - -
Sto3g2525 720 PRINTS Glycyl-tRNA synthetase signature 264 276 - -
Sto3g2525 720 PRINTS Glycyl-tRNA synthetase signature 283 300 - -
Sto3g2525 720 PRINTS Glycyl-tRNA synthetase signature 315 332 - -
Sto3g2525 720 PRINTS Glycyl-tRNA synthetase signature 332 342 - -
Sto3g2525 720 PRINTS Glycyl-tRNA synthetase signature 562 574 - -
Sto3g2525 720 PRINTS Glycyl-tRNA synthetase signature 647 666 - -
Sto3g2525 720 TIGRFAM glyS_dimeric: glycine--tRNA ligase 109 695 IPR002315 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Sto3g2525 720 Pfam tRNA synthetase class II core domain (G, H, P, S and T) 283 581 IPR002314 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Sto3g2525 720 PANTHER GLYCINE--TRNA LIGASE 1, MITOCHONDRIAL 25 720 - -
Sto3g2525 720 SMART WHEP_TRS_a_2_a_3_a 42 101 IPR000738 GO:0004812|GO:0005524|GO:0006418
Sto3g2525 720 Pfam WHEP-TRS domain 44 84 IPR000738 GO:0004812|GO:0005524|GO:0006418
Sto3g2525 720 PANTHER GLYCYL-TRNA SYNTHETASE/DNA POLYMERASE SUBUNIT GAMMA-2 25 720 IPR027031 -
Sto3g2525 720 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 109 587 IPR006195 -
Sto3g2525 720 Gene3D - 184 268 - -
Sto3g2525 720 Gene3D Bira Bifunctional Protein; Domain 2 113 474 IPR045864 -
Sto3g2525 720 SUPERFAMILY S15/NS1 RNA-binding domain 44 89 IPR009068 -
Sto3g2525 720 SUPERFAMILY Class II aaRS and biotin synthetases 108 611 IPR045864 -
Sto3g2525 720 CDD GlyRS_anticodon 578 698 - -
Sto3g2525 720 Gene3D - 606 717 IPR036621 -
Sto3g2525 720 ProSiteProfiles WHEP-TRS domain profile. 38 96 IPR000738 GO:0004812|GO:0005524|GO:0006418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g2525 K01880 - tcc:18608830 1230.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g2525 3 29347148 29353255 Sto3g2525 3 29347148 29353255 ECH