Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g2130 ATGGCGAAGAAGGGAGAAGACGTGGCGGTGGGAGTGCCGTATTACGGCTACGTCGGCGAAAACCCTTACCAAGCCGGAATTATCCCTCCCAACGCCTTCATCGGCGATCCCAAGGGCATCCCAATCCAACAAACCATTTACAGAGACACTCCTGCTCCTTTCAATTGCGTTTACTGTTCTCACAGTGGCCAAACTACAATTAGGTCAAAGCCAAGTCTGGCAGCATTTGTTGGTTGCATGATGCCAATGATGCTTGGAGtttgctttctttttccttcaatGGACTGCCTCTGGCATAAATATCATTACTGTCCTCATTGCCATGAGAAGGTCGCTGATTATGAGAAAACAGATCCCTGTATTGTAGTGGATCCTCCAAACTGGACACAGCAGAGCTTTGCATTGTCTGCACAATAA 417 0.4604 MAKKGEDVAVGVPYYGYVGENPYQAGIIPPNAFIGDPKGIPIQQTIYRDTPAPFNCVYCSHSGQTTIRSKPSLAAFVGCMMPMMLGVCFLFPSMDCLWHKYHYCPHCHEKVADYEKTDPCIVVDPPNWTQQSFALSAQ 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g2130 138 ProSiteProfiles LITAF domain profile. 36 116 IPR006629 -
Sto3g2130 138 PANTHER BNAC09G43880D PROTEIN 3 129 - -
Sto3g2130 138 Pfam LITAF-like zinc ribbon domain 49 114 IPR006629 -
Sto3g2130 138 PANTHER LIPOPOLYSACCHARIDE-INDUCED TUMOR NECROSIS FACTOR-ALPHA FACTOR 3 129 IPR037519 -
Sto3g2130 138 SMART litaf 51 116 IPR006629 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g2130 K19363 - vvi:100242123 236.498
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g2130 3 18185059 18186615 Sto3g2130 3 18185059 18186615 ECH