Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g2097 ATGACGGTGAGAGAGGCCCTGAACTCGGCACTTGATGAGGAAATGTCAGCTGATCATAAAGTATTCTTGATGGGTGAAGAGGTTGGGGAGTATCAAGGTGCATACAAGATATCTAAGGGGCTTCTTGAGAAGTATGGTCCGGAGAGGGTTCTTGACACTCCAATCACTGAGGCTGGGTTTACTGGGATTGGAGTTGGTGCTGCCTACTATGGTCTAAGGCCCGTTGTGGAGTTTATGACATTTAACTTTTCAATGCAGGTTTTAAGTGGGCAGCAAAGTTGCTTTGCAATTGATCACATTATCAATTCTGCTGCAAAATCAAATTACATGTCGGCTGGGCAAATATCTGTACCTATTGTCTTTAGAGGACCCAATGGTGCTGCCGCGGGGGTTGGTGCTCAGCATTCTCAGTGTTATGCAGCTTGGTATGCCTCGTGCCCTGGATTGAAGGTTTTGTCACCATATTCGTCAGAGGATGCTCGTGGTTTATTAAAAGCTGCTATTAGGGATCCTGATCCTGTTGTTTTCCTTGAAAATGAGTTGTTATATGGTGAGTCATTCCCTGTTTCAGATGAAGCTCTTGATTCAAGCTTTTGCCTTCCCATTGGGAAAGCCAAGATTGAGAGAGAAGGCAAAGATGTTACCATTACAGCTTTTTCAAAGATGGTTGGCTATGCTCTTAAGGCTGCTGAGATATTGTCAAAGGAAGGAATCAATGCTGAGGTCATAAATTTGCGATCAATCCGACCGCTCGATAGATCCACGATTAATGCTTCTGTCAGGAAAACCAATAGACTGGTAACAGTTGAAGAAGGATTTCCTCAGCATGGTGTTGGTGCTGAAATCTGCACCTCCGTTATTGAGGAGAGCTTTGGTTATCTTGATGCGCCGGTTGAGAGAGTTGCTGGGGCTGATGTTCCCATGCCTTATGCAGCCAATTTGGAGAGACTGGCTGTCCCACAGGTTGAAGATATTGTTCGAGCCGCAAAGAGAGCATGCTACAGATCCGTGCCAATGGCTGCTGCTGCTTGA 1032 0.4564 MTVREALNSALDEEMSADHKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLRPVVEFMTFNFSMQVLSGQQSCFAIDHIINSAAKSNYMSAGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASCPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSDEALDSSFCLPIGKAKIEREGKDVTITAFSKMVGYALKAAEILSKEGINAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICTSVIEESFGYLDAPVERVAGADVPMPYAANLERLAVPQVEDIVRAAKRACYRSVPMAAAA 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g2097 343 SMART Transket_pyr_3 1 185 IPR005475 -
Sto3g2097 343 Gene3D - 202 334 IPR009014 GO:0003824
Sto3g2097 343 Gene3D - 1 201 - -
Sto3g2097 343 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 1 191 IPR029061 -
Sto3g2097 343 SUPERFAMILY TK C-terminal domain-like 200 332 IPR009014 GO:0003824
Sto3g2097 343 Pfam Transketolase, pyrimidine binding domain 1 184 IPR005475 -
Sto3g2097 343 PANTHER DEHYDROGENASE RELATED 1 338 IPR027110 GO:0004739|GO:0006086
Sto3g2097 343 CDD TPP_PYR_E1-PDHc-beta_like 5 180 - -
Sto3g2097 343 Pfam Transketolase, C-terminal domain 203 325 IPR033248 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g2097 Sto-Chr3 17668531 17673674 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g2097 5 333 Acyl Lipid Metabolism Gene Families AT1G30120 41.033 6.44e-86 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g2097 K00162 - tcc:18608889 627.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g2097 3 17668531 17673674 Sto3g2097 3 17668531 17673674 ECH