LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto3g2018	ATGGCCACACTTTATTCAACGCGTTGCTGTTCACATCCGTCATTGCAATCGTCGTCTCAATCGTATCATCCTCACGCTCCTTCGCCGTCCAAGTTTGGGCATCTTCAACATCTCACCTTTTCCTCTTCGCCTTCGAAGCGCTTTCTTGCGGCTAAGGTTTCTCTGCAATCTCAATCCGATTCACCTCAGAATGCAGTCATTATGCAGCAGCAGGACGGTGCTGTTGCAACCTCAGTACCCCCTGTTAAAAACGAAAATCCTCTCAAGCGATTGAAAGATGAAATCTTGTCGGTTACATCTTCAGAGGAGTCAGAAGGTTTGGCAGTGTTTGATAACAATGGCAATGAGTCCACTGTTAGTATCACTGTAGTTGGAGCCTCTGGAGACCTAGCCAAGAAAAAGATATTTCCAGCCCTTTTTGCACTCTACTACGAGGATTGTCTCCCTAAGCACTTCACCATCTATGGTTATGCTCGAAGTAAGATGACAGATGCAGATCTAAGAAATATGGTTAGCAAGACCCTCACTTGTCGAATTGATAAGAGGGAGAACTGCAGTGAAAAGATGGAGGAATTCCTTAAAAGATGTTTTTACCATCCTGGTCAATATGATTCTGAGGAGAACTTTGCAGAACTAGACAGGAAGCTGAAGGAACATGAGGGTGGGAGAACAGCTAATCGCCTGTTTTATCTATCAATTCCTCCTAATATATTTATAGACGCTGTAAAGTGTGCAAGCATATCAGCATCTTCTGGTAATGGTTGGACAAGGGTCATTGTTGAGAAGCCTTTCGGTCGTGATTCTGAATCTTCAGCTGCTTTAACAAAATCTCTTAAGCAGTACCTGACAGAGGATCAAATTTTCAGGATTGACCACTATCTTGGGAAAGAGCTTGTGGAAAACCTGTCTGTTCTTCGATTCTCAAATCTCATTTTTGAACCCTTATGGTCAAGGCAGTATATAAGAAGTGTACAGTTGATATTCTCAGAAGACTTTGGCACTGAAGGACGTGGCGGGTACTTTGACAATTATGGGATAATTAGAGATATTATGCAGAACCATCTGCTTCAAATATTAGCCCTCTTTGCGATGGAAACCCCTGTTAGTTTAGATGCAGAAGACATAAGAAATGAAAAGGTCAAGGTTCTACGTTCAATGAGGCCCCTGCAACTTGAGGATGTGGTTATTGGTCAGTACAAGAGCCACTCGAAAGGAGGTGTTAATTATCCAGGCTACATTGATGATAAAACTGTACCAAAGGACAGCTTAACTCCTACATTTGCTGCAGCTGCCCTCTTCATAGATAATGCAAGATGGGACGGGGTGCCTTTTCTGATGAAGGCTGGGAAAGCGTTACATACCAAGAGGGCTGAGATACGGGTACAGTTCAGGCATGTTCCAGGCAATCTGTACAATCGAAATTTCGGTACAGATCTTGATCAAGCTACGAATGAGCTTGTTATAAGAGTTCAGCCTGGTGAGGCTATTTATCTGAAGATCAATAACAAAGTTCCTGGTCTGGGAATGAGGTTGGACTCTAGTCATCTGAATCTCCATTATGCAGCCAGATATTCGAAGGAGATTCCAGATGCTTACGAGAGGCTTCTTTTGGACGCAATCGAAGGAGAAAGGAGACTGTTTATACGGAGTGATGAGCTGGATGCTGCTTGGGCACTTTTTACACCTGTTTTGAAAGAGCTCGAAGAGAAAAAGATCATTCCAGAGTACTATCCTTATGGGAGCCGAGGTCCTGTTGGGTCTCACTATCTTGCAGCCAGGTACAATGTAAGATGGGGTGATAATGGTGTTGATGAATGA	1818	0.434	MATLYSTRCCSHPSLQSSSQSYHPHAPSPSKFGHLQHLTFSSSPSKRFLAAKVSLQSQSDSPQNAVIMQQQDGAVATSVPPVKNENPLKRLKDEILSVTSSEESEGLAVFDNNGNESTVSITVVGASGDLAKKKIFPALFALYYEDCLPKHFTIYGYARSKMTDADLRNMVSKTLTCRIDKRENCSEKMEEFLKRCFYHPGQYDSEENFAELDRKLKEHEGGRTANRLFYLSIPPNIFIDAVKCASISASSGNGWTRVIVEKPFGRDSESSAALTKSLKQYLTEDQIFRIDHYLGKELVENLSVLRFSNLIFEPLWSRQYIRSVQLIFSEDFGTEGRGGYFDNYGIIRDIMQNHLLQILALFAMETPVSLDAEDIRNEKVKVLRSMRPLQLEDVVIGQYKSHSKGGVNYPGYIDDKTVPKDSLTPTFAAAALFIDNARWDGVPFLMKAGKALHTKRAEIRVQFRHVPGNLYNRNFGTDLDQATNELVIRVQPGEAIYLKINNKVPGLGMRLDSSHLNLHYAARYSKEIPDAYERLLLDAIEGERRLFIRSDELDAAWALFTPVLKELEEKKIIPEYYPYGSRGPVGSHYLAARYNVRWGDNGVDE	605

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto3g2018	605	ProSitePatterns	Glucose-6-phosphate dehydrogenase active site.	291	297	IPR019796	GO:0004345\|GO:0006006
	Sto3g2018	605	PANTHER	GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE 2, CHLOROPLASTIC	46	604	-	-
	Sto3g2018	605	SUPERFAMILY	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	291	598	-	-
	Sto3g2018	605	TIGRFAM	zwf: glucose-6-phosphate dehydrogenase	119	599	IPR001282	GO:0006006\|GO:0016614\|GO:0050661
	Sto3g2018	605	Gene3D	-	115	289	-	-
	Sto3g2018	605	Pfam	Glucose-6-phosphate dehydrogenase, NAD binding domain	123	301	IPR022674	GO:0006006\|GO:0016614\|GO:0050661
	Sto3g2018	605	Pfam	Glucose-6-phosphate dehydrogenase, C-terminal domain	304	598	IPR022675	GO:0004345\|GO:0006006\|GO:0050661
	Sto3g2018	605	Hamap	Glucose-6-phosphate 1-dehydrogenase [zwf].	118	600	IPR001282	GO:0006006\|GO:0016614\|GO:0050661
	Sto3g2018	605	Gene3D	Dihydrodipicolinate Reductase; domain 2	290	599	-	-
	Sto3g2018	605	PRINTS	Glucose-6-phosphate dehydrogenase signature	257	270	IPR001282	GO:0006006\|GO:0016614\|GO:0050661
	Sto3g2018	605	PRINTS	Glucose-6-phosphate dehydrogenase signature	281	309	IPR001282	GO:0006006\|GO:0016614\|GO:0050661
	Sto3g2018	605	PRINTS	Glucose-6-phosphate dehydrogenase signature	333	350	IPR001282	GO:0006006\|GO:0016614\|GO:0050661
	Sto3g2018	605	PRINTS	Glucose-6-phosphate dehydrogenase signature	351	367	IPR001282	GO:0006006\|GO:0016614\|GO:0050661
	Sto3g2018	605	PRINTS	Glucose-6-phosphate dehydrogenase signature	438	464	IPR001282	GO:0006006\|GO:0016614\|GO:0050661
	Sto3g2018	605	PANTHER	GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD	46	604	IPR001282	GO:0006006\|GO:0016614\|GO:0050661
	Sto3g2018	605	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	117	304	IPR036291	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto3g2018	Sto-Chr3	16692639	16697945	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto3g2018	K00036		-	tcc:18608929	1004.97

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Sto3g2018	3	16692639	16697945	Sto3g2018	3	16692639	16697945	ECH