Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1932 ATGAGAAGACCATTGAGAAACTCCAATGATTACAAACTCGCCGCTGTCAATCATGACCACTTGGATGTCTTACCGGACGACCTCGTCGTTTTCATTCTCTGCAAGCTCAGTTCTACGGCGTCTTCGCCTTCTCAATTCGTCAATGTCCTCCTAACatGCAAAAGACTGAAGCGGCTGGGTTTGAGTCGGCTCGTATTGGCCAAGGCTGGAGAAAGAGTGTTTGAAATGAAGGCTGCGAATTGGTCGGACTATGCTCACCGGTTTCTCAAACGATGTGTTAACGCCGGCAACGTCGACGCCACCTACACTCTCGGAATGATCCAATTCTACTGTTTTCAAAATCGAGGGAGTGGGATTTCCCTTTTGGCGAGTGCTGCATCAAAATATCACGCGCCGTCGTTGTACTCCCTTGCGGTGACGCAATTCAACGGAAGCGGTAGCTTGACTAGCGAGAAGAATCTAAAAGCCGGCGTGGCTTTGTGCTTGCGAGCCGCCATCACCGGCCACATCGGCGCGCTTCGTGAGCTGGGCCATTGCCTCCAAGACGGCTACGGCGTGCGCCAGAACATCGCGGAGGGACGGCGGCTGCTCGTCCACGCCAACGTGCGTGAGCTCGCCCTGGTCGCCAAAACCAAATTCCCAACATCGCCGTCGACGACGTGGCACGTCCACCGGCAACAGAATGCCACGTGCCGTTTTCGGGAGCCGGTTTGTCCTTTGCTGAGCGATTACGGGTTCACCGAGGCAGTCCCAGAGATGCCGGCGGCGAATCGGTTCATGATGGAGTGGTTCGAGTCGTCGGGTCGCGGGGCGTTGGGGGAGGGTTTGAGACTGTGTCATGGAGGGTGTGGGCGGTCGGAGACACGACCGCTCGAGTTTCGAAGGTGCTCGGTTTGTGGGAAGGTGAACTATTGCTCGCGTGGGTGTCAAGCGATTGACTGGAAGGTGCGACACAAGATGGAATGTTTCCCGGTGGAATATTTGGTCGAgcagaatgttggaggaaatattGCTGCTATTGGTGATGAGAATGTGGCCATTGGATGA 1047 0.5425 MRRPLRNSNDYKLAAVNHDHLDVLPDDLVVFILCKLSSTASSPSQFVNVLLTCKRLKRLGLSRLVLAKAGERVFEMKAANWSDYAHRFLKRCVNAGNVDATYTLGMIQFYCFQNRGSGISLLASAASKYHAPSLYSLAVTQFNGSGSLTSEKNLKAGVALCLRAAITGHIGALRELGHCLQDGYGVRQNIAEGRRLLVHANVRELALVAKTKFPTSPSTTWHVHRQQNATCRFREPVCPLLSDYGFTEAVPEMPAANRFMMEWFESSGRGALGEGLRLCHGGCGRSETRPLEFRRCSVCGKVNYCSRGCQAIDWKVRHKMECFPVEYLVEQNVGGNIAAIGDENVAIG 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1932 348 PANTHER MYND DOMAIN-CONTAINING 11 338 IPR044508 -
Sto3g1932 348 Gene3D - 269 325 - -
Sto3g1932 348 ProSiteProfiles Zinc finger MYND-type profile. 280 322 IPR002893 -
Sto3g1932 348 Pfam MYND finger 283 322 IPR002893 -
Sto3g1932 348 SUPERFAMILY HCP-like 83 197 - -
Sto3g1932 348 PANTHER HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN 11 338 - -
Sto3g1932 348 Gene3D Tetratricopeptide repeat domain 62 209 IPR011990 GO:0005515
Sto3g1932 348 SUPERFAMILY HIT/MYND zinc finger-like 288 326 - -
Sto3g1932 348 SUPERFAMILY F-box domain 8 77 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1932 Sto-Chr3 15679458 15681411 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1932 - - adu:107463542 419.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1932 3 15679458 15681411 Sto3g1932 3 15679458 15681411 ECH