Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1879 atggaggagaagaaggaggaagcaAAGCAGCCAGCTGAGGAGAAAAAGCGGGACGAGAAGACTCCGCCGGCGCCGGCGCCGACACCGACACCGGAAATTGTTCTGAAAGTGTACATGCATTGCGAAGGTTGCGCTCGCAAGGTTCGTCGGTCCCTAAAAGGGTTCCAAGGTGTTGAAGATGTGATGACGGATTGGAAGACGCAGAAGGTGGTTGTGAGAGGAGAGAAGGCGGATCCGGTGAAGGTGTTGGAGAGAGTGCAGAAGAAGAGCCATAGAAAAGTCGAGCTTATTTCTCCGATCCCCAAACCACCGTCCACGGCGGAGGACGAGAAAAAACCTcaagagaaggagaaggagaagatgacCTTGCctgaggagaagaagaaggaagaagaggttgagCCTAAGACGATCATCACAGTGGTTCTGAAAGTTCACATGCATTGCGAGGCTTGCGCACAGGAAATCCAGAGACGCATACTGAGAATGAAGGGGGTGGAATCGGCGAGATCCGATCTGAAGAACTCACAGGTGAGCGTGAAGGGGGCGTTCGAACCGGCGAAGCTCGTGGAGTTCGTGTACAAGCGAACGGGGAAGAAAGCGATCAAACATGGTGTGGTTGAGCAAGACGATTTGTTACGATACGATTTGGTGCAATCTTATGCGGCTTATGGTGGTCCGGCGCGAGCTGCGGTCGCCGTGGGACGTGGGAATGGTGGCGCGGCTAGTCGTTGGAGTGGATTATTATATGAAGCCAGTGTTGATGTTGTTATATCCTTTCTATTGTTGGTGGCATGGCTGGTTCTTCCACACTTCAATGGGGCTGCGTTCTTGTATGACAAGTTCGTGAGAGAGCACATCAAGAGATACGTGACGGGAACAGAGCATAGGCAGCACCACAGCCCCAACCACAAGGAAGACAAGTCTCCTACACGTACTAGTAAGGGCAAGAAAAAGTTCGTCGACTTTCTCACTCCCAAAAAAGGTGATCACGAGGTGTATTGA 1005 0.4786 MEEKKEEAKQPAEEKKRDEKTPPAPAPTPTPEIVLKVYMHCEGCARKVRRSLKGFQGVEDVMTDWKTQKVVVRGEKADPVKVLERVQKKSHRKVELISPIPKPPSTAEDEKKPQEKEKEKMTLPEEKKKEEEVEPKTIITVVLKVHMHCEACAQEIQRRILRMKGVESARSDLKNSQVSVKGAFEPAKLVEFVYKRTGKKAIKHGVVEQDDLLRYDLVQSYAAYGGPARAAVAVGRGNGGAASRWSGLLYEASVDVVISFLLLVAWLVLPHFNGAAFLYDKFVREHIKRYVTGTEHRQHHSPNHKEDKSPTRTSKGKKKFVDFLTPKKGDHEVY 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1879 334 Pfam Heavy-metal-associated domain 36 89 IPR006121 GO:0046872
Sto3g1879 334 Pfam Heavy-metal-associated domain 143 194 IPR006121 GO:0046872
Sto3g1879 334 ProSiteProfiles Heavy-metal-associated domain profile. 147 193 IPR006121 GO:0046872
Sto3g1879 334 CDD HMA 39 95 IPR006121 GO:0046872
Sto3g1879 334 MobiDBLite consensus disorder prediction 105 129 - -
Sto3g1879 334 SUPERFAMILY HMA, heavy metal-associated domain 33 89 IPR036163 GO:0046872
Sto3g1879 334 Gene3D - 30 102 - -
Sto3g1879 334 SUPERFAMILY HMA, heavy metal-associated domain 138 201 IPR036163 GO:0046872
Sto3g1879 334 CDD HMA 142 201 IPR006121 GO:0046872
Sto3g1879 334 Gene3D - 135 203 - -
Sto3g1879 334 MobiDBLite consensus disorder prediction 92 129 - -
Sto3g1879 334 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7 3 203 IPR044577 GO:0046872
Sto3g1879 334 ProSiteProfiles Heavy-metal-associated domain profile. 39 95 IPR006121 GO:0046872
Sto3g1879 334 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 3-LIKE 3 203 - -
Sto3g1879 334 MobiDBLite consensus disorder prediction 1 32 - -
Sto3g1879 334 MobiDBLite consensus disorder prediction 293 334 - -
Sto3g1879 334 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1879 Sto-Chr3 15060540 15075258 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1879 - - gra:105764799 244.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1879 3 15060540 15075258 Sto3g1879 3 15060540 15075258 ECH