Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1707 ATGTTTGAAACAATTGCCCGAGATCTACTTCTGGAGAGAACTGACCATACCCTCGAGCTCTATGAGGGTAGTGGCTCTAACTGGAGACTGATCAAAAGTGGAACACCTGGTAATCTAGGCAGTTTTGAAgatgtcctttttgctaacagtGAAATGCAAGATTCCCCTGTTGTTGTTGCTCTAGCACCTAACTTCCGAGAAAATGGGTGCACCATTGGATTGGGATTTGTTGATCTAACTAAGAGAGTACTGGGGATGGCTGAATTTCTTGATGATAGTCACTTCACAAATGTGGAGTCAGCATTGGTTGCTCTTGGTTGCAAGGAATGTCTTCTTCCTACAGAGAGTGGCAAGTCTAGTGAAAGTAGAATGTTACATGATGCATTGACCAAGTGTGGTGTGATGTtaacagaaagaaagaaatctgAGTATAAAACCAGAGATCTGGTACAAGATCTTGGCAGGCTTGTTAAAGGCTCAATTGAGCCAGTTCGAGATTTAGTGTCTGGGTTTGAAGTTGCACCTTGTGCTTTGGGAGCATTACTATCTTATGCAGAGTTACTTGCAGATGAAAGTAATTATGGAAATTATACTCTTCAAAGGTATAATCTTGACAGCTACATGAGGTTAGATTCGGCTGCTATGAGGTCGCTTAATGTCCTAGAAAGCAAAACTGATGCGAACAAAAATTTTAGCTTGTTTGGTCTTATGAATAGGACCTGCACTGCTGGAATGGGGAAACGGTTGTTGCACATGTGGCTAAAGCAGCCCTTATTAGATTCTTGTATAAGACTACCATACATTAAAAGTGCACTGGAAAGATATGATGGAGAGTTTTCTCTAATGATGAAGAAAAGGTATTTGGAACCTCTTGAGTTATGGACTGATGATGATCACCTAAACAAATTCATTGGTCTCGTGGAAGCTGCTGTTGACCTTGATCAACTGGAGAATGGGGAATACATGATTTCTTCAAATTATGACTCTACACTAAGTAAACTGAAGGAGCAGCAAGAGTCACTAGAGAGCCAAATACACAACTTGCACAGACAAACTGCTAATGACCTTGACCTACCAATAGATAAGGCATTAAAGTTAGACAAGGGCACACAATTTGGACATGTTTTTAGAATCACAAAGAAGGAAGAGCCAAAAATAAGGAAGAAGCTCAGCACTCAGTTTATTGTATTGGAGACGAGGAAAGATGGGGTGAAGTTTACCAATACAAAGCTTAAGAAGCTAGGGGATCAGTATCAAAAGATACTTGAGGAGTACAAGAACTGTCAAAAGGAGTTGGTGTTTGAGTCTTTGGCTGGATTACTTTCTGAATTGGATGTTTTACAAAGCTTTGCTGATTTAGCTTCAAGTTGTCCAACTCCTTACACAAGGCCTGACATCACTTCTATGGAAGAAGGAGATATTATACTAGAAGGCAGTAGACACCCTTGTGTTGAGGCTCAAGACTGGGTGAATTTTATACCAAATGACTGGCCTAACATGGGTGGGAAATCTACATTTATCCGACAGGTGGCTGTGAATATTTTGATGGCTCAAGTTGGTTCCTTTGTTCCTTGTGACAAGGCCAGCATATCTGTCCGTGATTGCATTTTTGCTCGTGTTGGTGCAGGTGACTGCCAACTTCGAGGAGTTTCTACATTTATGCAAGAGATGCTTGAAACTGCATCAATATTAAAAGGAGCTACAGACAAGTCGTTGATAATCATTGATGAATTAGGACGTGGAACATCAACTTATGATGGATTTGGTCTAGCCTGGGCCATTTGTGAGCACATTGTTGAACTGATTAAAGCACCTACATTGTTTGCAACCCACTTTCATGAACTGACTGCATTAGCCCTCGAAAATGTAAATGATGATCCACAGAGGAATATTGTTGGTGTGGCAAACTATCACGTTAGTGCACATATTGACTCATCAACTCGCAAGCTGACTATGCTATACAAGGTTGAACCAGGAGCTTGTGATCAAAGTTTTGGTATTCATGTTGCTGAGTTTGCTAATTTCCCAGCAAGTGTTGTTGCTCTAGCAAGAGAAAAAGCAGAAGAATTGGAAGATTTCTCTCCATCTGCAATACACTTGGCTGATGCTACAAAGGAGGCCGGTACTAAACGGAAGAGAGATTTTGAACTCGATGAGGTCTCTAAAGGGGCTGCAAGGGCACGCCAATTCCTTGAAGCGTTTGCCGATTTGCCATTGGAAACTATGGATAAAATGCAAGCTTTGCAAGAAATAAGAAAGTTAAAGGATGATTTAGAGAGCGATGCAAAAAGCTATGGCTGGCTGCAGCAATTCTTGTAG 2319 0.4041 MFETIARDLLLERTDHTLELYEGSGSNWRLIKSGTPGNLGSFEDVLFANSEMQDSPVVVALAPNFRENGCTIGLGFVDLTKRVLGMAEFLDDSHFTNVESALVALGCKECLLPTESGKSSESRMLHDALTKCGVMLTERKKSEYKTRDLVQDLGRLVKGSIEPVRDLVSGFEVAPCALGALLSYAELLADESNYGNYTLQRYNLDSYMRLDSAAMRSLNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDSCIRLPYIKSALERYDGEFSLMMKKRYLEPLELWTDDDHLNKFIGLVEAAVDLDQLENGEYMISSNYDSTLSKLKEQQESLESQIHNLHRQTANDLDLPIDKALKLDKGTQFGHVFRITKKEEPKIRKKLSTQFIVLETRKDGVKFTNTKLKKLGDQYQKILEEYKNCQKELVFESLAGLLSELDVLQSFADLASSCPTPYTRPDITSMEEGDIILEGSRHPCVEAQDWVNFIPNDWPNMGGKSTFIRQVAVNILMAQVGSFVPCDKASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHIVELIKAPTLFATHFHELTALALENVNDDPQRNIVGVANYHVSAHIDSSTRKLTMLYKVEPGACDQSFGIHVAEFANFPASVVALAREKAEELEDFSPSAIHLADATKEAGTKRKRDFELDEVSKGAARARQFLEAFADLPLETMDKMQALQEIRKLKDDLESDAKSYGWLQQFL 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1707 772 Pfam MutS domain II 58 197 IPR007860 GO:0005524|GO:0006298|GO:0030983
Sto3g1707 772 Gene3D - 324 408 - -
Sto3g1707 772 Coils Coil 411 431 - -
Sto3g1707 772 SMART DNAend 228 487 IPR007696 GO:0005524|GO:0006298|GO:0030983
Sto3g1707 772 PANTHER DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER 2 757 IPR045076 GO:0005524|GO:0006298|GO:0030983|GO:0140664
Sto3g1707 772 SUPERFAMILY DNA repair protein MutS, domain II 70 223 IPR036678 GO:0005524|GO:0006298|GO:0030983
Sto3g1707 772 Gene3D MutS, connector domain 36 204 IPR036678 GO:0005524|GO:0006298|GO:0030983
Sto3g1707 772 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 461 692 IPR027417 -
Sto3g1707 772 Coils Coil 324 351 - -
Sto3g1707 772 Pfam MutS domain III 214 451 IPR007696 GO:0005524|GO:0006298|GO:0030983
Sto3g1707 772 Pfam MutS family domain IV 326 424 IPR007861 GO:0005524|GO:0006298|GO:0030983
Sto3g1707 772 Gene3D - 205 258 - -
Sto3g1707 772 SMART mutATP5 498 688 IPR000432 GO:0005524|GO:0006298|GO:0030983
Sto3g1707 772 Pfam MutS domain V 498 691 IPR000432 GO:0005524|GO:0006298|GO:0030983
Sto3g1707 772 Gene3D - 462 767 IPR027417 -
Sto3g1707 772 ProSitePatterns DNA mismatch repair proteins mutS family signature. 571 587 IPR000432 GO:0005524|GO:0006298|GO:0030983
Sto3g1707 772 PIRSF MSH2 1 263 IPR011184 GO:0005524|GO:0006298|GO:0030983
Sto3g1707 772 PIRSF MSH2 259 772 IPR011184 GO:0005524|GO:0006298|GO:0030983
Sto3g1707 772 PANTHER DNA MISMATCH REPAIR PROTEIN MSH2 2 757 IPR032642 GO:0003677|GO:0005524|GO:0006298|GO:0032300
Sto3g1707 772 SUPERFAMILY DNA repair protein MutS, domain III 211 456 IPR036187 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1707 Sto-Chr3 13140302 13147354 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1707 K08735 - gmx:100792272 1295.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1707 3 13140302 13147354 Sto3g1707 3 13140302 13147354 ECH