LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto3g1703	atgGCGAAGCCTCGCAAGCCGAAGAACGAAGATCCCAAGCCCGAGAATTCTGGCGCCGTAGTTCACCACCAGAAGCTCTGCCTCTCCGTCGATATGGATAAGCGTCATGTCTACGGGTATACTGAATTGGAAATTGTGGTGCCCGAGATTGGGATTGTCGGCCTGCACGCGGAGAATATAGGCATCGGGAATGTTTTGGTTGATGGCGAGCCTACGGAGTTTGAGTATTACCCGCATCATCAGCAGCAAGGGGAGAATGAGAAGAGATGGAGCTCGACGTTTTCTCCTAGCTCGGCTGCTGATGTTGCGGGCTCGGTGTATTTGTCTGCGCTCGAAAAGGAACTGGTGCCGAATTTACTAATTAATTGCTGTAAACCTTTTAAGATTGAAAGTGAACAGCAGGAGCAGCCCGTTTCTGAAAATGGGTTTCATTCTTCTGGGGAGGACAAGGACAAGCAGAATGTAAGATTTATTCGCATTGACTATTGGATTGAGAAGGCAGAAACTGGGATCCACTTCAAAGATGGTGTTCTTCATACTGATAACCAGATAAGGAGAGCAAGGTGTTGGTTCCCTTGTATAGATGACAATTCACAGCGATGCTGTTATGATCTGGAGTTCACAGTTGCTCAAAATCTTGTGGCTGTCAGCACTGGAAGCTTACTCTACCAGGTTCTTAGCAAGGATAATCCTCCTCGGAAAACATATGTCTATAAATTGGATGTTCCAGTTAGTGCACGGTGGATATCTTTAGTTGTTGGTCCATTTCAAATTCTTCCAGACTGCCAAATTAGTCAAGTATCACATATGTGTTTGCTACCTAATCTATCAAAGCTACGGAATACTGTGGAATTTTTTCATAGCGCATTCAGCTGCTATAAGGATTACCTTTCTGTAGACTTCCCATTTGACTCATACAAGCAAGTTTTCATAGAGCCGGAGATGGCAGTTTCATCATTAAGCTTAGGAGCTTCTGTTAGTATATTTAGTTCTCAAGTTTTGTTTGATGAGAAGGTTATTGACCAGACAATTGATACAAGGATAAAACTTGCGTATGCCCTTGCAAGACAGTGGTTTGGTGTGTATATAACCCCTGAGGCAACAAATGACGAGTGGCTCTTGGAAGGGCTTGCTGGTTTTTTaacagatttttatattaagaaaCATTTGGGAAATAATGAGGCACGGTACCGAAGATACAagGCAAATTGTGCTGTTTGTAAAGCAGATAATAGTGGAGTGACTGCTTTGTGCTGTTCAGCTTCTTGTAAGGATTTGTATGGAACACAATGTATAGGTTTATATGGAAAAATAAGATCATGGAAGTCCGTAGCTATTCTTCAAATGTTGGAAAAGCAGATGGGTCCCGAGTCTTTCCGTAAAATTTTGCAGACAATTGTTTCTCGGGCTCAAGATAAAACGCGTTGTGTAAAAACTCTCAGTACTAAGGAGTTTCGGCATTTTGCCAATAAGGTTGGAAATTTGGAACGTCCATTTCTCAAAGAGTTCTTCCCTCGATGGGTtgcttcatgtggatgtcctaTACTTAGGATGGGGTTTTCCTATAACAAAAGGAAGAATATGGTTGAATTGGCAGTGTTGCGGGGATGCACGGCATTAACAAATTCTAGTGCATCAGTTCTTGATATTAATCCAGAAACTGAAAATCGAGATGGAGATACTGGATGGCCTGGGATGATGAGTATTAGGGTCTATGAACTTGATGGTATGTATGACCATCCAATTCTACCTATGGCTGGGGAAGCATGGCAACTATTGGAAATTCAATGCCACTCAAAGCTTGCTGCTAGACGCTTCCAGAAGCCTAAGAAAGGTTCAAAACCTGATGGATCTGACGATAATGGTGATGTACCTTCCATGGATGTGCGTAGCAGTACCGAATCCCCTTTGTTGTGGATCAGAGCAGATCCTGAGATGGAGTACCTTGCCGAGATTCATTTTAATCAGCCAGTTCAGATGTGGATTAATCAATTAGAGAAAGACAAAGATGTTATGGCTCAGGCTCAAGCAATTGCAACCCTAGAGGCATTGCCCCAGATATCATTTGCTGTCGTAAATGCCTTAAACAACTTTCTAACTGACTCCAAGGCTTTTTGGAGAGTTCGAATTGAAGCTGCCTTTGCTTTGGCTAGTACAGCATCTGAGCAGGAAACTGATTGGGCTGGTCTACTCCATTTGGTGAAATTTTATAAGAGTCGAAGGTTTGATCCTGATATTGGACTCCCAAAACCAAATGACTTTCATGATTTTGCCGAGTATTTTGTTCTTGAGgcTATTCCACATGCTGTAGCTATGGTCAGAACTGCTGACAAGAAAAGCCCAAGAGAGGCTGTGGACTTTGTTTTACAGTTACTGAAGTACAATGACAACAATGGGAACCCTTACTCAGACGTGTTCTGGCTTGCTGCATTGGTCCAGTCTGTTGGCGAGCTTGAGTTTGGGCAGCAGGTTGATAATTTAGTTATTCTTTCTGCCCAATGGCTAGTCCGCGAAATTTTGGGCTATCAAATGATTGGAACACATTGGCATAGTTTGATTCTCATCTTAAAGGTTAGCATAAAATATTGCATTGGATCAAATTCAAAGGCGCTGTTAGGCACTAAGGTGAGGATCCCAACCGATGGATCTCTTGCACCATGGCGCCTACTCTCTAAAAAAGGTGATAAAGAAAtattagaaaacaaaaagacaCAATCTTCTCTTCAACTTTGCTCGGGCATGTGCCTTTTTGTCGCCTCTCGCCTAAGGCATTTTAGCGGCTTGGCGCCCTTTGACTACCTTGGACCCAACCCAATTATGGATGAACCACAAGATTCTACAATTCAGAAAAGTGAGACTGTTTTCTCCATGTTGCCTGGGTTCATTTTGACCCATTGGAACTTGGCTATGCTAGGCTTCCTTTGTAACACAAACTATCTGATGTACCTCCCCTCAGAAGCTAATGAATTGTGCCTCTGCCAAGTGCCAATTATCACTGTAGGTGAGTGttctattatttaa	3021	0.4201	MAKPRKPKNEDPKPENSGAVVHHQKLCLSVDMDKRHVYGYTELEIVVPEIGIVGLHAENIGIGNVLVDGEPTEFEYYPHHQQQGENEKRWSSTFSPSSAADVAGSVYLSALEKELVPNLLINCCKPFKIESEQQEQPVSENGFHSSGEDKDKQNVRFIRIDYWIEKAETGIHFKDGVLHTDNQIRRARCWFPCIDDNSQRCCYDLEFTVAQNLVAVSTGSLLYQVLSKDNPPRKTYVYKLDVPVSARWISLVVGPFQILPDCQISQVSHMCLLPNLSKLRNTVEFFHSAFSCYKDYLSVDFPFDSYKQVFIEPEMAVSSLSLGASVSIFSSQVLFDEKVIDQTIDTRIKLAYALARQWFGVYITPEATNDEWLLEGLAGFLTDFYIKKHLGNNEARYRRYKANCAVCKADNSGVTALCCSASCKDLYGTQCIGLYGKIRSWKSVAILQMLEKQMGPESFRKILQTIVSRAQDKTRCVKTLSTKEFRHFANKVGNLERPFLKEFFPRWVASCGCPILRMGFSYNKRKNMVELAVLRGCTALTNSSASVLDINPETENRDGDTGWPGMMSIRVYELDGMYDHPILPMAGEAWQLLEIQCHSKLAARRFQKPKKGSKPDGSDDNGDVPSMDVRSSTESPLLWIRADPEMEYLAEIHFNQPVQMWINQLEKDKDVMAQAQAIATLEALPQISFAVVNALNNFLTDSKAFWRVRIEAAFALASTASEQETDWAGLLHLVKFYKSRRFDPDIGLPKPNDFHDFAEYFVLEAIPHAVAMVRTADKKSPREAVDFVLQLLKYNDNNGNPYSDVFWLAALVQSVGELEFGQQVDNLVILSAQWLVREILGYQMIGTHWHSLILILKVSIKYCIGSNSKALLGTKVRIPTDGSLAPWRLLSKKGDKEILENKKTQSSLQLCSGMCLFVASRLRHFSGLAPFDYLGPNPIMDEPQDSTIQKSETVFSMLPGFILTHWNLAMLGFLCNTNYLMYLPSEANELCLCQVPIITVGECSII	1006

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto3g1703	1006	MobiDBLite	consensus disorder prediction	1	20	-	-
	Sto3g1703	1006	Pfam	Peptidase family M1 domain	284	477	IPR014782	GO:0008237\|GO:0008270
	Sto3g1703	1006	SUPERFAMILY	Metalloproteases ("zincins"), catalytic domain	274	517	-	-
	Sto3g1703	1006	SUPERFAMILY	Leukotriene A4 hydrolase N-terminal domain	17	255	IPR042097	-
	Sto3g1703	1006	PANTHER	TRANSCRIPTION INITIATION FACTOR TFIID	17	828	IPR037813	GO:0005669
	Sto3g1703	1006	CDD	M1_like_TAF2	23	508	-	-
	Sto3g1703	1006	MobiDBLite	consensus disorder prediction	1	18	-	-
	Sto3g1703	1006	MobiDBLite	consensus disorder prediction	609	623	-	-
	Sto3g1703	1006	Gene3D	tricorn interacting facor f3 domain	19	254	IPR042097	-
	Sto3g1703	1006	Gene3D	Neutral Protease Domain 2	264	512	IPR027268	-
	Sto3g1703	1006	MobiDBLite	consensus disorder prediction	605	630	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto3g1703	K03128		-	gmx:100792795	1502.26

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Sto3g1703	3	13080399	13096898	Sto3g1703	3	13080399	13096898	ECH