Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1698 ATGCAGTGCACCAGGCCAGAACAAGGGTGGTTGTCAGCAGTGCCATTCTTGATCAGCTCCAAGGCTTCCTCAGAATCGCattctaaagttactgaacgAAAACTCTTGCACCAGAGTTATATCTCTGATCCAATTGTGTTGTTGAAtaagttttttcttcttcttagttACAATTGTGTTGGACTGATCAGACAGGTGACAGTTGGAGTAGATGACCATAAATCAATGATGGAGGTGGCGCTCATTCCAAATATGGATCCTGTAAATATTGCCCTTGGTTCTTCAGAAAAGGCAAATCCTATAAATTCCGTGAAgccaagaaagaaaacaatgaCGTCAGTTTATCTGAAGTTCTTTGAGACAGCTGCAGATGGGAAGAGCCGGAGATGCAAATTTTGCGGACAAAGCTATTCTATTGCAACTGCCACAGGCAATTTGGGAAGGCATCTTGCCAATCGCCATCCCGGTTATGATAAGTCAGGGGATTCTGTCAGCAATACAGTAACTCAGCCCACTGTTGTGGTCAAGAAGAGTCAACCTCAAGGAAAAGCAAACCAGGTGGATTATGATCATCTAAATTGGTTGCTCATTAGGTGGCTTGTTATAGCTTCTCTTCCCCCATCAACTCTGGAGGAGAAGTGGCTAGCAAACTccttcaagtttctaaattctTCTATACAACTCTGGCCAAGTGAGAAGTATAGATCTGTACTTGATGAAGTCTTCAGAAGTATGAGGGAAGAAGTGAAAGCATTTTTAGAACAGGTTTCTTCCAAGTTCTCCATCACAGTTGATTTCTGGACTTCTTTTGAACAGATTTTTTATATGAGTGTCACTTGTCAGTGGATCGATGAAAACTGGTGCTTCCAGAAAGTGCTGCTTGATATATGTCGCATACCTTATCCATGTGGTAGTGCAGAGATATATCATGCCCTCGTTAAAGTTCTCAAAATGTACAATATTGAAAATAGAGTCCTCTCATGTACCCATGATAATAGTCAAAGTGCTGTGCATGCTTGCCATACTTTGAAAGAGGACTTAGATGCTCAGAAGGTAGGGCCATTCTGTTATATTCCCTGCGCTGCTAGAACTTTGAGCTTGATTATAGATGATGGATTGAGATCCACAAAGTCAATAATTTCTAAGATCCGGGAATTCATAATAGAATTGAATGCCTCATCAGAGATGTCTGAGGATTTCATTCAAATGTCTACAGCCTttcaagaaggtacttggaaaTTTCCACTTGATGTTTCAGCAAGGTGGAGTGGAAACTACCAGATGCTTGACATTGTTCGCAAGACAGGTAAATCTATGGATGCAGTTATCCGTAAATATGAGGAAGCACTTGGTAGTAGGATGATGCTGAACTCTACAGAAAAAAGTGTGGTTGGCATCGTGCATCAATATCTGGAACCATTCTACAAGACCACAAATAACATATGCACAAGTAAGGTGCCCACAGTTGGCCTGGTCCTTTTCTTCATGGATCATATCTCAGAAACAATTGCTTCCTGCAGAGAATCCCGTCATAGCCCGGATTGGCTGAAAAGTTCGGCAGAAGAAATGGCGAAAAAGGCAAGAACTTACATCAATCAGGTTTGCAACATATTCACATATATGACAGCAATTCTAGACCCTAGAATTAAGGGAGAGCTAATCCCTGAGTCTTTAAACCAAGACAATTTTCTAGAGGAAGCAAGAACCCATTTTACCAGAAATTATTCCACCACTCACTTCTCTTCCATGAGTAGTGGATACAGTGCTCAAGAAATTGAAGATGGAGGCGTTTCCTTTGCCGAGGAAATCGCTCGTAAGAAACGACGGGCAAGCATGAGCTCCGGCACGGACGAGCTCACTCAGTATCTTTTAGAAGCTCCAGCTCCAATACCCACAGATGTTCTCGAGTGGTGGAAGGTCAATAGCACACGATACCCGCGGCTATCTGTAATGGCTAGGGATTTCCTCGCCGTGCAGGCGACTTCAGTTGTACCAGAAGAACTTTTCTGTGGAAAGGGTGATGAGATCAACAAGCAACGATTCTGTATGTCACATGAAAGCACACAAGCTATACTCTGTATCAAAGCATGGGTTCAATTTGGCATCAAGTTCAAGTTTAAGTCAACTGAGATTGATTACGAAAGATTGATGGAACTAGCAGCTGCTGCTGCAACAGATAATAGCACTGCTAATTCGGACAAGAAGCCAAAATTAtga 2217 0.4064 MQCTRPEQGWLSAVPFLISSKASSESHSKVTERKLLHQSYISDPIVLLNKFFLLLSYNCVGLIRQVTVGVDDHKSMMEVALIPNMDPVNIALGSSEKANPINSVKPRKKTMTSVYLKFFETAADGKSRRCKFCGQSYSIATATGNLGRHLANRHPGYDKSGDSVSNTVTQPTVVVKKSQPQGKANQVDYDHLNWLLIRWLVIASLPPSTLEEKWLANSFKFLNSSIQLWPSEKYRSVLDEVFRSMREEVKAFLEQVSSKFSITVDFWTSFEQIFYMSVTCQWIDENWCFQKVLLDICRIPYPCGSAEIYHALVKVLKMYNIENRVLSCTHDNSQSAVHACHTLKEDLDAQKVGPFCYIPCAARTLSLIIDDGLRSTKSIISKIREFIIELNASSEMSEDFIQMSTAFQEGTWKFPLDVSARWSGNYQMLDIVRKTGKSMDAVIRKYEEALGSRMMLNSTEKSVVGIVHQYLEPFYKTTNNICTSKVPTVGLVLFFMDHISETIASCRESRHSPDWLKSSAEEMAKKARTYINQVCNIFTYMTAILDPRIKGELIPESLNQDNFLEEARTHFTRNYSTTHFSSMSSGYSAQEIEDGGVSFAEEIARKKRRASMSSGTDELTQYLLEAPAPIPTDVLEWWKVNSTRYPRLSVMARDFLAVQATSVVPEELFCGKGDEINKQRFCMSHESTQAILCIKAWVQFGIKFKFKSTEIDYERLMELAAAAATDNSTANSDKKPKL 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1698 738 SMART bed5 110 157 - -
Sto3g1698 738 Pfam hAT family C-terminal dimerisation region 618 698 IPR008906 GO:0046983
Sto3g1698 738 Pfam BED zinc finger 116 155 IPR003656 GO:0003677
Sto3g1698 738 PANTHER BED FINGER-RELATED 88 708 IPR045259 -
Sto3g1698 738 PANTHER BED ZINC FINGER AND HAT DIMERIZATION DOMAIN-CONTAINING PROTEIN 88 708 - -
Sto3g1698 738 Pfam Domain of unknown function (DUF4413) 482 566 IPR025525 GO:0003677
Sto3g1698 738 SUPERFAMILY Ribonuclease H-like 246 699 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1698 Sto-Chr3 13018411 13027765 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1698 - - jre:109010516 1135.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1698 3 13018411 13027765 Sto3g1698 3 13018411 13027765 ECH