Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1675 TTGACTGTGTCATGTGTGATTAGGGAAAATGCTGTTTTGACAAACGTTGGCCAGCTGCTAGAGAGGAGGGGTAAAGAGTTCTTGGGTTCTGCATATAAGGATCCTATTACAAGCTTTTCTGATTTCCAGAAATTTTCAGTCTCAAATCCTGAGGTTTACTGGAGAGCCGTACTGGATGAGATGAATATATCATTTTCCATACCACCTAAATGCATCTTGCAAGAAAGTCCCCCTGGAGAAAGCCAATTATCATTCCCAGGTGGTCAATGGCTTCCTGGAGCATCTATTAATCCAGCCAAGAATTGTTTAACTATAAATTCCAAAAGGAGTTTGAATGATACAGTAATAATAACGCGTGATGAACGACATGATGATCTGCCTCCACACAGAATGACCCTTAAGGAATTGCGTGAAGAGGTTTGGTTAGTAGCATATGCACTCCAAGCACTGGGTCTAGAGAAAGGATCTGCAATTGCCATTGATATGCCAATGAATGTCAAATCTGTGGTTATCTACCTAGCTATCGTTCTGGCAGGTTATGTTGTTGTGTCAATAGCTGATAGTTTTGCAGCACGTGAAATATCAACCAGGCTAAAAATTTCAAAGGCAAAAGCCATATTTACTCAGGATCTCATTATTCGGGGTGATAAAACCCTGCCCTTGTACAGTAGAATTGTGGATGCTGGGTCACCTGTGGCTATAGTCATCCCTAGCAGAGGGTCTGGATTTAGCATGAAACTGCGCAGTGGTGACCTTTCTTGGTGTGATTTTCTGGAAGCAGTCAACAGTCTCAAAGGCAAGGAATTTATCGCTGTAGAACAACCGGCAGAAGCATTTACAAACATTCTCTTTTCTTCTGGAACAACAGGTGATCCAAAGGCCATTCCATGGACCAATGTAACTCCACTAAAAGCTGCTGCTGATGGATGGTGTCACACTGATATTCGTAAAGGTGATGTAGTTGCCTGGCCCACTAATCTTGGATGGATGATGGGTCCGTGGCTACTATATGCTTCATTGATAAATGGAGCTTCAATGGCCTTATATGAAGGTTCCCCTCTTGGGTCTGGCTTTGCCAAGTTTGTACAGGATGCTAAAGTAACAATGCTTGGTGTGATTCCAAGTCTTGTTCGGTCTTGGAAAAGTACAAATTCCACAGCTGGCTATGATTGGTCTGccatccgTTGCTTTGGCTCCACCGGAGAAGCATCAAGTGTAGATGAATGCCTTTGGCTGATGGGGAGATCTCACTACAAACCTATTGTTGAATATTGTGGTGGTACAGAGATTGGCGGTGGCTTTGTTAGTGGATCATTACTACAGGCTCAATCATTGGCTGCTTTCAGCACACCTGCGATGGGCTGCAGTCTCTTTATCCTTGGTGATGATGGCTATCCTATTCCAGAAAATGTTCCTGGAATGGGTGAATTGGCTCTTGGACCCCTCATATTTGGGTCTTCCAGTACACTACTGAATGCTGACCATTATAGTGTCTACTTTAAGGGTATGCCTTCATGGAATGGGAAGCTTTTGCGAAGGCATGGGGATGTATTTGAGCGTACTTCTAGAGGATACTATCGAGCGCATGGGCGAGCAGATGATACAATGAACCTTGGGGGAATCAAGGTGAGTTCTGTTGAGATCGAACGCATATGCAATGGAGTTGACACCAATATACTGGAAACAGCTGCTATAGGAGTTCCACCTGCAGGAGGTGGGCCCGAGCAGTTGGTTATAGCCGTTGTATTCAAGAATTCAAACAACCCAATATCAGACATACATCAATTGAGGACGTCTTTCAACTCTGCTCTCCAAAAGGCACTAAATCCTTTGTTCAGgGTTTCTCGTGTGGTGCCACTGTCATCTCTACCTCGAACAGCGTCAAATAAGGTTATGAGAAGGGTTTTGCGGAAGCAGCTTTCCGAAATTAGCCGCATTTCTAAGCTCTAA 1950 0.4374 LTVSCVIRENAVLTNVGQLLERRGKEFLGSAYKDPITSFSDFQKFSVSNPEVYWRAVLDEMNISFSIPPKCILQESPPGESQLSFPGGQWLPGASINPAKNCLTINSKRSLNDTVIITRDERHDDLPPHRMTLKELREEVWLVAYALQALGLEKGSAIAIDMPMNVKSVVIYLAIVLAGYVVVSIADSFAAREISTRLKISKAKAIFTQDLIIRGDKTLPLYSRIVDAGSPVAIVIPSRGSGFSMKLRSGDLSWCDFLEAVNSLKGKEFIAVEQPAEAFTNILFSSGTTGDPKAIPWTNVTPLKAAADGWCHTDIRKGDVVAWPTNLGWMMGPWLLYASLINGASMALYEGSPLGSGFAKFVQDAKVTMLGVIPSLVRSWKSTNSTAGYDWSAIRCFGSTGEASSVDECLWLMGRSHYKPIVEYCGGTEIGGGFVSGSLLQAQSLAAFSTPAMGCSLFILGDDGYPIPENVPGMGELALGPLIFGSSSTLLNADHYSVYFKGMPSWNGKLLRRHGDVFERTSRGYYRAHGRADDTMNLGGIKVSSVEIERICNGVDTNILETAAIGVPPAGGGPEQLVIAVVFKNSNNPISDIHQLRTSFNSALQKALNPLFRVSRVVPLSSLPRTASNKVMRRVLRKQLSEISRISKL 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1675 649 ProSitePatterns Putative AMP-binding domain signature. 282 293 IPR020845 -
Sto3g1675 649 PANTHER ACYL-ACTIVATING ENZYME 17, PEROXISOMAL-RELATED 8 648 - -
Sto3g1675 649 PANTHER ACYL-ACTIVATING ENZYME 17, PEROXISOMAL-RELATED 8 648 - -
Sto3g1675 649 Pfam AMP-binding enzyme 128 538 IPR000873 -
Sto3g1675 649 SUPERFAMILY Acetyl-CoA synthetase-like 41 642 - -
Sto3g1675 649 Gene3D - 25 533 IPR042099 -
Sto3g1675 649 Gene3D - 534 649 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1675 Sto-Chr3 12803774 12812498 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1675 11 512 Acyl Lipid Metabolism Gene Families AT5G23050 70.518 0.0 729
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1675 - - gmx:100779628 1088.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1675 3 12803774 12812498 Sto3g1675 3 12803774 12812498 ECH