Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1654 CTGATGGGGTTGAAGACGTTAGGGGAGAGCAAGGTGGAGAAGCTGAGGAATTCAATGGCGGCATCCTCGAGGTCGAGAATGAAATTGTGGCTGATACGTGCTACGACGTCGGTTTTGCTATGGACATGTATCGTCCAGTTAACGGCTTTGGGTGATATGTGGGGGCCTAGAGTTTTGAAAGGCTGGCCATCTTGTTTTACTCACGAGTCTGCGGCTAGGGCTTTGGATATTGAGTTGCCTTCTGCTCGCCCAGTAGTTCTTCCACCCAAGAGAGTTTATAAAAACAATGGTTACCTGATGGTCTCATGCAATGGAGGACTGAACCAAATGAGAGCAGCGATATGTGACATGGTAACCATCGCAAGATATTTAAATGTCACCCTTATAGTACCTGAACTGGATAAAGTCTCCTTCTGGGCTGATCCTAGTGAGTTTCAAGATATATTTGATTTGGATCATTTTATTACATCCTTGAGAGATGAGGTGCGGGTATTGAAAGAGTTGCCTCCTAGACTCAAGCTGAAAGTGGAACATGGGATGCTTTACAGCATGCCACCAATTAGTTGGTCTGATATATCTTACTATAAGAACCAGATTCTACCTCTGATACAAAAGTACAAAGTTGTCCATCTTAATCGAACTGATGCTCGACTGGCCAATAATGGGCTACCTTTGGAGATTCAGAAGCTGCGTTGCCGAGTTAATTTTGGTGCTCTTAGGTTTACTTCTCAGATAGAGGAGTTGGGCAGAAAGGTTATCAGGCTTCTAAGGCAAAATGGTCCATTTCTGGTACTTCACCTAAGGTATGAGATGGACATGCTGGCATTTTCCGGCTGCACTCAAGGTTGTAATAGTGATGAGGTGGAAGAGTTGACAAGAATGAGATACGCTTATCCATGGTGGAAAGAAAAAATCATCAATTCTGATTTGAAAAGGAAAGATGGTTTGTGTCCTTTAACACCTGAGGAGACTGCCCTTACACTTAGCGCTCTTGGCATTGATCGAAACATTCAGATCTACATTGCAGCTGGGGAAATATATGGTGGTGAAAGGAGAATGGCAAGCCTTGCAAAGGAGTACCCAAAATTGGTCAGGAAGGAGACACTATTAGAACCATCTGACCTTCAATTCTTCCAAAACCATTCCTCTCAGATGGCTGCATTGGATTATCTAGTCTCATTAGAGAGTGATATCTTTGTCCCCACATATGATGGAAATATGGCTAAAGTAGTTGAAGGCCATCGCAGATATCTTGGATTTAAGAAGACAATATTATTGAACAGAAAGCTTCTAGTTGATTTGATAGATCAGTTCAACAATGGAGTACTGAACTGGGATGAATTCTCATCAGCTGTGAAGGAATCTCATGCTGATCGTATGGGTAACCCAACTAAAAGGTTGGTAATTGCTGACAAGCCCAAGGAAGAGGATTATTTCTATTCCAATCCAGAGGAGTGTTTAGAACCATCAGATGAACATTTGAGTAGTACATGA 1494 0.4257 LMGLKTLGESKVEKLRNSMAASSRSRMKLWLIRATTSVLLWTCIVQLTALGDMWGPRVLKGWPSCFTHESAARALDIELPSARPVVLPPKRVYKNNGYLMVSCNGGLNQMRAAICDMVTIARYLNVTLIVPELDKVSFWADPSEFQDIFDLDHFITSLRDEVRVLKELPPRLKLKVEHGMLYSMPPISWSDISYYKNQILPLIQKYKVVHLNRTDARLANNGLPLEIQKLRCRVNFGALRFTSQIEELGRKVIRLLRQNGPFLVLHLRYEMDMLAFSGCTQGCNSDEVEELTRMRYAYPWWKEKIINSDLKRKDGLCPLTPEETALTLSALGIDRNIQIYIAAGEIYGGERRMASLAKEYPKLVRKETLLEPSDLQFFQNHSSQMAALDYLVSLESDIFVPTYDGNMAKVVEGHRRYLGFKKTILLNRKLLVDLIDQFNNGVLNWDEFSSAVKESHADRMGNPTKRLVIADKPKEEDYFYSNPEECLEPSDEHLSST 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1654 497 Pfam GDP-fucose protein O-fucosyltransferase 98 418 IPR019378 -
Sto3g1654 497 CDD O-FucT_plant 98 423 IPR024709 -
Sto3g1654 497 PIRSF UCP009360 4 484 IPR024709 -
Sto3g1654 497 PANTHER OS02G0726500 PROTEIN-RELATED 12 492 - -
Sto3g1654 497 PANTHER GDP-FUCOSE O-FUCOSYLTRANSFERASE-LIKE PROTEIN 12 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1654 Sto-Chr3 12571916 12574709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1654 94 487 Miscellaneous Gene Families AT2G37980 50.000 7.40e-135 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1654 K23280 - gmx:100793244 899.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1654 3 12571916 12574709 Sto3g1654 3 12571916 12574709 ECH