Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1651 ATGGACTTCTGGAACAAAGCTCGAAGTTTCGCTGAGGAAGCCGCCAAGCGCACGCAGGACCTCACGAAGGAAGCCGCTAAGCGTTCACAGGACCTCTCCTTCGGGTCCTCCACTTTCTCGGACATCGTAGCCGAGACCACCAAACGCTCCAAGGAAATCGCCGCAGAAGCTTCCAAGCGAGCCGACCAGATCAGAATCGAAGCCATCAAGCGAGCCGATCAGATCAAACACTTAGCCGATGGGATTAATGCGCCTGCGCCGGCGCCGGCGGAGGCGGAATCCTATGTGGGCAGTGACACTCTAGAGAAGGATTTGGAGAGGTTTGGAATCACCGAAGAATTGAGAGAGTTCATTAAAGGGATCACTCCGACCACGTTTCGCGATTTTCCTCTTGAAGATGATACTCGACTGTCTGATGTTCCTACAGTGTCGAATGTTAGGCAGGATCTAACTGAGTGGCAGGAAAAGCATGCCAATCTTGTTCTTTCTACTGTCAAGGAGATTTCAAAATTAAGGTATGAACTGTGTCCACGTGTCATGAAAGAGAGGAAGTTCTGgagaatatattttattcttatgaACAGCCATGTTGCACCCTATGAGAAGCGCTACATGGAGGACGCTAAGCCAGAACCATCTGAACTAGTAGATAACAAAGCTATTGAACCACCAGAAGTTAGACCAACTACCAATAAAGGGGTGCAGGAATATGCTAAGCCAGAATCATCTGAACAAGTAGATAACAAGGAAATTGAATCATCAGAAGTTAGACCGACTTCCAGTAAAGGGGTCCAGGAATATGCTAAGCCAGAATCATCTGAACAAGTAGATAATAAGGCAGTTGAACCACCAGAAGTCAGACCGACTTCCAGTAAAGGGGTGCAGGAAGTTAAAAAGGAGAACAGACCTTCATCAGCTGAGCAAGACTTGGATGAATTTCTTTTGGGAGACAGTGATGAAGACCCAGGAGATAAATCCTTTCATAAGACCACTCCAATAAGATGGAGTACAAAGTTCTTGCTTGTCTTTGTTACACCAGAGCCTAGACTGCAAATTTATTTAGAACAGGAAGGAGCATTTACTACCATTTCCAGTGATAGTGTGATCACAAGAGAATTTCGTGCTGAATCTATTTTATATGCTGTGGatgatgatgatgacgatGCAGCCTTTGATGATGATTTGGATAAAATGGTGGATAGTTCGGTAAGCACGATATGCATTATACTACCTCCAGActga 1242 0.4428 MDFWNKARSFAEEAAKRTQDLTKEAAKRSQDLSFGSSTFSDIVAETTKRSKEIAAEASKRADQIRIEAIKRADQIKHLADGINAPAPAPAEAESYVGSDTLEKDLERFGITEELREFIKGITPTTFRDFPLEDDTRLSDVPTVSNVRQDLTEWQEKHANLVLSTVKEISKLRYELCPRVMKERKFWRIYFILMNSHVAPYEKRYMEDAKPEPSELVDNKAIEPPEVRPTTNKGVQEYAKPESSEQVDNKEIESSEVRPTSSKGVQEYAKPESSEQVDNKAVEPPEVRPTSSKGVQEVKKENRPSSAEQDLDEFLLGDSDEDPGDKSFHKTTPIRWSTKFLLVFVTPEPRLQIYLEQEGAFTTISSDSVITREFRAESILYAVDDDDDDAAFDDDLDKMVDSSVSTICIILPPD 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1651 413 SMART wurzfinal6 145 197 IPR005607 -
Sto3g1651 413 PANTHER BSD DOMAIN-CONTAINING PROTEIN 1 325 - -
Sto3g1651 413 MobiDBLite consensus disorder prediction 211 329 - -
Sto3g1651 413 SUPERFAMILY BSD domain-like 109 203 IPR035925 -
Sto3g1651 413 Gene3D BSD domain 121 206 IPR035925 -
Sto3g1651 413 MobiDBLite consensus disorder prediction 242 256 - -
Sto3g1651 413 Pfam BSD domain 152 196 IPR005607 -
Sto3g1651 413 PANTHER BSD DOMAIN PROTEIN 1 325 - -
Sto3g1651 413 MobiDBLite consensus disorder prediction 292 307 - -
Sto3g1651 413 ProSiteProfiles BSD domain profile. 145 197 IPR005607 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1651 Sto-Chr3 12551952 12556622 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1651 2 209 EF-hand Containing Proteins AT1G69030 50.649 2.74e-68 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1651 - - bhj:120071581 314.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1651 3 12551952 12556622 Sto3g1651 3 12551952 12556622 ECH