Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1645 ATGGCAGATGACTCCGATAAAGAAATCCAAATCCGAACCCTTTCCGGCGAATCCATCACTCTTCGCTTCCCTTCCACCACAACCGTTCAACACCTCAAGCTTCTTCTCAACCAAACCTTCCCTCCCGCCTCTGCCTCCCCcaatttccacctatttttCAAGGGTGACAAGTTGAGGTTGCAGAGTCAGATTGGTTGTTACCCCATCGAACCCGGTGAGTTTCTTGTTTTAGTTCCGTTTACCAAGAAATCGAACCAGTGTGAAGATTCTGGAACTCCGATGAACGTGGCTGATACCGCTTCAATCTCGAAACTCGCTGATTCTACCTGGTCTAATATAATGGAGGATTTATCATACTTACGAGAGACTGAGGGTAatgtattaaatgatgatgatgatgatgatgcatcTAATTTCAAGTTCAGTGATGAACATAAAAAAGAGAAGATGGTGGACACCACTAGTTCTAACTCTTCCGAGGCAAAATCCTATTGGGGTTTCGGTTCTGATAAGCAGATAGAGCTTCCTTATCACCTCATATTGAATACAATGCAACATTCCAGTGAGGCTGCTCTTGGTGAACACAATTGTGAAGTCCTTTTGAAGGTTTTGGAGTCGATAAATTGCTTATCAGACCTTCCTCTTGGACACTGCAAGTTGTTTAAAAAAGCACGTTTTAAGGGAGTTAGCTTGGCGAATAATGGTAGTTCATGCTTGTGTCCCCCATGGTTGAAGAAACTGATGAAGGCATTCACATTCATAAACATTTTTTCTGCGTTTCTTCATTTGCAGTGTAAGAAAACAACCTTAAACCTATTGGAAGATGCACTGAATCAACTTGCAAATTTTGGAGTTGAGCTTACTATTCAGGACATGAAGCATCTTTCCCTTCTTTGTCCTGGGCTACTATGTTTCGCAACTGATGGAGTAAATACTAGTTTTGGCGATGCCATTGTTGTTATTAACCATTTAGCGGGAGATGAAGATAAGAAAGATCCTCCAAAAAGAGGTCGCAGGTGGTTGTATGTTTCAAAGATTGTAAGTACATTGAAGAGAAGGGACAGTTCTTTCCGTAACAATCTGTGGCTGGCCTTTTCGCGGCAGCTGAGTGTATGTGGAGATGAGTTGGCTTTGAAAATTTCTTTGGAAGACTTGCTTGCATCAGTCAAGGACCAAGGTTCTACTAAAAATGAAAGCAAACCAAAACACATAAAGAGAAGCTCAAATACTTTAAAATCTGATTCGGACCATGTTAAGTGTCATGTTTCCTCTTTGGCTTCTTCTGAACTTTCTGCTGCTCATTTGGACATGTCATCGATTCCGGCTGTGGAAATGGTTGAGCATCTTCAAAAAGGAATTGGATCTGAAGGACagATTGTGCATGTCGAAGACATTTGTGAAAGGAAAGCAATTTATGCAGAGCTCCCAATTGAATTGTCAGAAAACATGAAATCTGCACTGGATAATATGGCAATTTCCAAGTTGTATAGCCACCAGGTAGAGTCTATAAAAGCCTCCGTCTGTGGTAAGGATGTTGTTGTGGCAACAATGACGTCCAGTGGCAAATCACTCTGCTATAACTTACCAGTTTTAGAAGGGTTGCTAAAGAATTCATCATCATGTGCTCTGTACATATTTCCAACAAAGGCATTAGCTCAAGATCAGTTAAGAGCTTTGTTATATATGACAAAAGTATTTGATGTTGACTTCAATATTGGTATATATGATGGAGATACTTCTCAGAATGAGAGGACATGGCTGCGTGATAATTCTAGACTGTTGATCACAAATCCAGATATGTTACACATATCCATCTTGCCTCATCATCAGCGTTTTAGTCGGATTTTATCAAATCTCAGGTTTGTTGTAATTGATGAAACTCATACTTATAAGGGAGCATTTGGATGTCATACTGCCCTTATATTAAGGAGGCTAAAGCGACTCTGCTCACATGTATACGGATCTGTTCcatcttttgttttttctaCTGCAACTTCTGCAAATCCTTGTGAGCATTGTACGGAACTTGCAAATTTACCAACAGTGGAGCTTGTTCAGAATGATGGTAGTCCATCTACAAGGAAGCTTTTTATCCTTTGGAATCCTCTTCTGCGTCCCAAACCTTTCTTGAAAAAGGCTAAGTTTGCTAACGGTGCCAATGAAGATGCAGAAGAAAGTGCTAATTTCGTTCGTTCAAGtCCAATTGTGGATGTTTCACGACTTTTTGCAGAAATGGTTCAGCATGGTCTTCGTTGCATAGCATTTTGCAAGTCCCGGAAACTTTGTGAACTTGTTCTATCCTATACACAGGAGATTCTTCATGAGACAGCCCCGCATCTGGTAAATTCCATATGTGCATATCGTGGTGGCTACATTCCAGAGGAAAGGAGAAAAATAGAGAGTCAATTTTTTGGTGGTAAAATTTGTGGAGTTGCTGCAACCAATGCTCTCGAGTTGGGCATTGATGTTGGAGAAATTGATGTGACTCTGCATTTAGGATTTCCTGGCAGTATCGCTAGCTTGTGGCAACAGGCTGGCAGGGGTGGAAGGAGAGATAGACCATCCCTTGCAGTGTATGTTGCCTTTGGAGGTCCTCTTGATCAATACTTTATGAAACATCCAAAGAAACTGTTTAGTAGACCCATTGAATGCTGTCATGTTGATGCCCAAAACAAGCAGGTTCTTGAACAACATTTGGTCTGTGCAGCTCATGAACTCCCTCTGAGTGTGCTTTATGATGAGCAGTATTTTGGTCCTTGCTTAGAGAGTGCTTTAATTTCTCTAAAAGCTAAAGGATACTTGACTTTTGGTCAATCATCAGATTCTTCTGCTAGAATATGGAAATACATTGGTCCTGAGAAATTACCTTCACATGCTGTCAATATCCGAGCAATAGAAACTATAAGATATGAGGTCATAGATCAGCAAAGAAAACAAGTTCTTGAAGAGATAGAAGAAAGCAAGGCTTTCTTTCAGGTGGTATATGAAGGGGCTGTGTACATGTGCCAAGGTAAAACCTATTTGGTTGAGAAATTAGATCTATCCAACAAGGTTGCTTTCTGCAAAGAGGCTGATCTGAAGTACTATACAAAGACTCGAGATTACACTGATATTCATGTCATAGGGGGTAATATAGCTTATCCAGTAAAGATTTCCAAAGATACGCTACCAAAAACAAATGCTCGAGCTCATATTTGTAAAGTAACAACTACTTGGTTTGGTTTTTATCGTATTTGGAGAGGAagcaatcaaatatttgatgcTGTTGACCTAGCACTTCCTCCATATTCATACGAGTCACAGGCAGTTTGGATTCCAGTACCGCAGTCAATAAAAGAAGCAGTAGTCAAGCAAAACTACGATTTTCGTGGAGGCTTGCATGCTGCATCACATGCTGTTTTAAATGTAGTGCCTTTATATATAACATGCAACTTGTCTGACTTGGCTCCTGAGTGTGCAAATCCTCACGATAGCCGTTATCAACCAGAAAGAATTCTAATATATGATCAACATCCTGGAGGGTCTGGCTTATCGTTACAGTGCCAACCCCTTTTCTCGAAGTTGCTAGTAGCTGCATTAGAGCTTCTTTCATCTTGCCACTGTTCAGCTGAAGTGGGTTGCCCTAACTGTGTTCAGAGCTTTGCTTGCCATGAGTATAATGAAGTATTACACAAGGAAGCTGCCATTATGATCATCAAGGGTGTTCTAGATGCAGAAATGTAG 3723 0.3991 MADDSDKEIQIRTLSGESITLRFPSTTTVQHLKLLLNQTFPPASASPNFHLFFKGDKLRLQSQIGCYPIEPGEFLVLVPFTKKSNQCEDSGTPMNVADTASISKLADSTWSNIMEDLSYLRETEGNVLNDDDDDDASNFKFSDEHKKEKMVDTTSSNSSEAKSYWGFGSDKQIELPYHLILNTMQHSSEAALGEHNCEVLLKVLESINCLSDLPLGHCKLFKKARFKGVSLANNGSSCLCPPWLKKLMKAFTFINIFSAFLHLQCKKTTLNLLEDALNQLANFGVELTIQDMKHLSLLCPGLLCFATDGVNTSFGDAIVVINHLAGDEDKKDPPKRGRRWLYVSKIVSTLKRRDSSFRNNLWLAFSRQLSVCGDELALKISLEDLLASVKDQGSTKNESKPKHIKRSSNTLKSDSDHVKCHVSSLASSELSAAHLDMSSIPAVEMVEHLQKGIGSEGQIVHVEDICERKAIYAELPIELSENMKSALDNMAISKLYSHQVESIKASVCGKDVVVATMTSSGKSLCYNLPVLEGLLKNSSSCALYIFPTKALAQDQLRALLYMTKVFDVDFNIGIYDGDTSQNERTWLRDNSRLLITNPDMLHISILPHHQRFSRILSNLRFVVIDETHTYKGAFGCHTALILRRLKRLCSHVYGSVPSFVFSTATSANPCEHCTELANLPTVELVQNDGSPSTRKLFILWNPLLRPKPFLKKAKFANGANEDAEESANFVRSSPIVDVSRLFAEMVQHGLRCIAFCKSRKLCELVLSYTQEILHETAPHLVNSICAYRGGYIPEERRKIESQFFGGKICGVAATNALELGIDVGEIDVTLHLGFPGSIASLWQQAGRGGRRDRPSLAVYVAFGGPLDQYFMKHPKKLFSRPIECCHVDAQNKQVLEQHLVCAAHELPLSVLYDEQYFGPCLESALISLKAKGYLTFGQSSDSSARIWKYIGPEKLPSHAVNIRAIETIRYEVIDQQRKQVLEEIEESKAFFQVVYEGAVYMCQGKTYLVEKLDLSNKVAFCKEADLKYYTKTRDYTDIHVIGGNIAYPVKISKDTLPKTNARAHICKVTTTWFGFYRIWRGSNQIFDAVDLALPPYSYESQAVWIPVPQSIKEAVVKQNYDFRGGLHAASHAVLNVVPLYITCNLSDLAPECANPHDSRYQPERILIYDQHPGGSGLSLQCQPLFSKLLVAALELLSSCHCSAEVGCPNCVQSFACHEYNEVLHKEAAIMIIKGVLDAEM 1240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1645 1240 Gene3D - 732 859 IPR027417 -
Sto3g1645 1240 Pfam Ubiquitin family 9 78 IPR000626 GO:0005515
Sto3g1645 1240 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 503 684 IPR014001 -
Sto3g1645 1240 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 737 893 IPR001650 -
Sto3g1645 1240 SMART helicmild6 771 852 IPR001650 -
Sto3g1645 1240 CDD Ubl_ubiquitin_like 9 78 - -
Sto3g1645 1240 SMART ultradead3 491 697 IPR014001 -
Sto3g1645 1240 MobiDBLite consensus disorder prediction 395 412 - -
Sto3g1645 1240 CDD DEXHc_Hrq1-like 495 676 - -
Sto3g1645 1240 CDD SF2_C_Hrq 697 861 - -
Sto3g1645 1240 ProSiteProfiles Ubiquitin domain profile. 7 78 IPR000626 GO:0005515
Sto3g1645 1240 Pfam DEAD/DEAH box helicase 497 666 IPR011545 GO:0003676|GO:0005524
Sto3g1645 1240 Gene3D - 4 91 - -
Sto3g1645 1240 Pfam Helicase conserved C-terminal domain 744 850 IPR001650 -
Sto3g1645 1240 SUPERFAMILY Ubiquitin-like 8 78 IPR029071 -
Sto3g1645 1240 PANTHER ATP-DEPENDENT HELICASE HRQ1 23 1239 - -
Sto3g1645 1240 Pfam MrfA Zn-binding domain 1129 1211 IPR018973 -
Sto3g1645 1240 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 542 870 IPR027417 -
Sto3g1645 1240 MobiDBLite consensus disorder prediction 391 412 - -
Sto3g1645 1240 Gene3D - 468 681 IPR027417 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1645 - - gmx:100819522 1804.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1645 3 12462536 12474735 Sto3g1645 3 12462536 12474735 ECH