Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1620 ATGGCCCAGAACCAAAGCCACACGAGGAGGAGCGTTCTGGACTCTCTAGGCGAAGAAATTGTCAGAATCATCGCACCAGTATCAATCTGCATGATTTTGGTAGTCTTATTGGTCTCAATCCTCAACAATCCCAACGATTCCTCTTCAGCATCATCATCAATCTCCAGCATAGCCACTATGGCTTACAGTGAGACAACCTCGGACTCTTCCTGGGACAAATTCCTAGGTGCCCTTTTGAACTCCTTAGCATTTGTAGCCATTGTCACTGTCATAACCTTTGTTCTGGTCCTTCTCTTCTATCTCCGATGCACCAAGTTCTTAAAACTATACATgggtttctcttcttttcttgttttaggGTTCTTAGGAGGTGAAATTGCATTATTCATAATTGAAGATTATGCTATTCCCATTGATTGCATAACATTCTTTCTGGTTCTGTTCAATTTTTCTGTTGTGGGTGTATTGGCTGTTTTTATGTCCAAAATGGCAATTGTTGTGACACAAGGCTACTTGGTTCTTATTGGAATGTTGGTTGCTTATTGGTTTACCATGTTGCCTGAATGGACCACATGGGTGCTTCTGGTTGCTATGTCACTGTATGATCTTGCTGCTGTTTTGTTACCTGTTGGGCCATTAAGGCTTTTGGTAGAACTTGCTATATCTAGAGATGAAGAGATTCCTGCATTGGTTTATGAGGCTAGGCCAATTATGAACTATGATGATTTGGATCCAAGAAGTGGTGTAACTCAGAGAAGGGTTTGGAGAGATAGTAGAAGGATTGATGATTCAAGTCTTAATAATTATGAATCAAACTCAATGCACGAGGATCCCAGTGTACGAGAATCCCACCAGGTGGGATCTGAGGAGGGTCAGATGTACGCAACCTTACCATTGCAAGCAGCGAGGCTGACTCCTGGATTTGAACCCGTGATCTCCAGGTCACATGGCAACAACTCTACCGTTGACAGAAATTTGGTCAGAGCTGAAGAAGGACATGTTTTGGAAACTAATGATGATTCACAGCTCTCTGCTCCTTTGATTGATCATGGAAGAAATGTCCAACTTCATCAGAGAGAAGGtgatcatgatgatgatgatgcagtGCCAACAAGTAGTGAAAGTTTGATGCTAGAGGGAATTGGATTGGGTTCATCAGGAGCAATAAAGCTTGGGCTTGGAGACTTCATTTTCTATAGTGTTTTGGTTGGCAGGGCAGCAATGTATGATTATATGACAGTGTATGCATGCTATCTTGCTATCATTGCTGGTTTGGGCATCACTCTGATGCTTCTGGCATTGTATCAGAAAGCTTTGCCGGCTCTTCCGGTGTCGGTAATGCTGGGTGTGTTGTTCTATTTCTTGACCAGGTTCTTGCTTGAAGAATTTGTTGTACAGTGTTCTTTGAACCTCTTGATGTTCTAG 1425 0.4112 MAQNQSHTRRSVLDSLGEEIVRIIAPVSICMILVVLLVSILNNPNDSSSASSSISSIATMAYSETTSDSSWDKFLGALLNSLAFVAIVTVITFVLVLLFYLRCTKFLKLYMGFSSFLVLGFLGGEIALFIIEDYAIPIDCITFFLVLFNFSVVGVLAVFMSKMAIVVTQGYLVLIGMLVAYWFTMLPEWTTWVLLVAMSLYDLAAVLLPVGPLRLLVELAISRDEEIPALVYEARPIMNYDDLDPRSGVTQRRVWRDSRRIDDSSLNNYESNSMHEDPSVRESHQVGSEEGQMYATLPLQAARLTPGFEPVISRSHGNNSTVDRNLVRAEEGHVLETNDDSQLSAPLIDHGRNVQLHQREGDHDDDDAVPTSSESLMLEGIGLGSSGAIKLGLGDFIFYSVLVGRAAMYDYMTVYACYLAIIAGLGITLMLLALYQKALPALPVSVMLGVLFYFLTRFLLEEFVVQCSLNLLMF 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1620 474 MobiDBLite consensus disorder prediction 266 289 - -
Sto3g1620 474 PANTHER PRESENILIN 10 474 - -
Sto3g1620 474 Gene3D Presenilin 382 466 IPR042524 -
Sto3g1620 474 Pfam Presenilin 17 464 IPR001108 GO:0004190|GO:0016021|GO:0016485
Sto3g1620 474 PRINTS Presenilin family signature 24 34 IPR001108 GO:0004190|GO:0016021|GO:0016485
Sto3g1620 474 PRINTS Presenilin family signature 185 192 IPR001108 GO:0004190|GO:0016021|GO:0016485
Sto3g1620 474 PRINTS Presenilin family signature 202 219 IPR001108 GO:0004190|GO:0016021|GO:0016485
Sto3g1620 474 PANTHER PRESENILIN 10 474 IPR001108 GO:0004190|GO:0016021|GO:0016485
Sto3g1620 474 SMART psh_8 75 460 IPR006639 GO:0004190|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1620 Sto-Chr3 12149806 12151230 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1620 1 474 Miscellaneous Gene Families AT2G29900 61.263 3.12e-161 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1620 K04505 - qsu:112005098 557.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1620 3 12149806 12151230 Sto3g1620 3 12149806 12151230 ECH