Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1618 ATGGAAGGGTTGGTGAGTTCTGGGATCAAGATCAACCCAGTTCGTGCTTATAATAGTACAAATCATAATTTCCGTTtgcttcctccttcttcttcttcttctacactACAGCTGAGGAAGAAGAGTACCTATGGATTTCGATTTGGGATTATGAAGCAGCCCTCGTCATTTAATGTAACTGCTGCTTCGGTTCAGCCAGCTGGGAGTTCAAATGTGAGCCATTTTGGGAACACGGTGCCTTCCAAAGAGATTCATGAGCTTTGGAGAAATGCTGGTGCTGTGTGCTTTGATGTGGATAGCACTGTGTGCGTGGATGAAGGTATTGATGAGCTCGCTGAGTTTTGTGGAGCTGGAAAGGCGGTTGCTGAATGGACTGCTAGAGCAATGGGTGGTTCTGTTCCTTTTGAGGATGCATTAGCTGCTAGACTATCCTTGTTCAGCCCTTCTTTGTCTCAAGTCCAGAATTTTCTTGAGCAAAGGCCCCCAAGGCTTTCCCCTGGCATTCAAGAGTTAGTTGAGAAGCTAAAGGCTAATCACATTCATGTTTATCTGATCTCGGGGGGCTTCCGTCAAATGATCAATCCTGTTGCGTCGATACTCGGAATTCCTCAAGAGAATATTTTTGCCAACCAACTGCTTTTTGGTAGCTCTGGAGAGTTTCTTGGGTTTGATAAGAATGAGCCTACGTCAAGGAGTGGAGGAAAAGCTACTGCTGTGCAACAAATCAGGAAGGTTCATGGCTACAAAGCATTAGCTATGATAGGGGATGGTGCAACTGATCTTGAGGCTCGTAGACCAGGTGGTGCTGACTTGTTCATCTGTTACGGGGGTGTTCAACTTAGAGAAGCAGTTGCTGCAAAAGCTGATTGGCTAGTTTTCAATTTCAAAGACCTCATAAATTCATTGGGTATGATTCCCGCGGTTCAAAAATCTTGTGACCCAGTGAGCTAA 951 0.4374 MEGLVSSGIKINPVRAYNSTNHNFRLLPPSSSSSTLQLRKKSTYGFRFGIMKQPSSFNVTAASVQPAGSSNVSHFGNTVPSKEIHELWRNAGAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEDALAARLSLFSPSLSQVQNFLEQRPPRLSPGIQELVEKLKANHIHVYLISGGFRQMINPVASILGIPQENIFANQLLFGSSGEFLGFDKNEPTSRSGGKATAVQQIRKVHGYKALAMIGDGATDLEARRPGGADLFICYGGVQLREAVAAKADWLVFNFKDLINSLGMIPAVQKSCDPVS 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1618 316 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 93 264 - -
Sto3g1618 316 PANTHER BNAA06G12800D PROTEIN 30 302 - -
Sto3g1618 316 TIGRFAM serB: phosphoserine phosphatase SerB 82 287 IPR004469 GO:0006564|GO:0036424
Sto3g1618 316 Gene3D - 155 302 IPR023214 -
Sto3g1618 316 Pfam haloacid dehalogenase-like hydrolase 93 265 - -
Sto3g1618 316 PANTHER PHOSPHOSERINE PHOSPHATASE 30 302 - -
Sto3g1618 316 CDD HAD_PSP_eu 93 295 - -
Sto3g1618 316 SUPERFAMILY HAD-like 83 302 IPR036412 -
Sto3g1618 316 Gene3D Phosphoserine phosphatase; domain 2 104 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1618 Sto-Chr3 12131644 12134693 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1618 K01079 - gmx:100789869 459.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1618 3 12131644 12134693 Sto3g1618 3 12131644 12134693 ECH