Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1616 CTGTTTAGAATCGTCCAAGGCCTTGCCGGAGAAGAGATGGACGGCGCTGATTTTCCGGAGCATCCGCCACCGTGGACCGTACGGCGCGAACACGAGGTCCTGATAGTTATAAGCCATATGCTTGGCTCCGGAGTTAGGCGGTCTGCTCAAGAAATTAAAGTCATGAACCTTCAAGAACTGCTCGGCCACGGAAGCCGAGGCCGCCACCACCACGTCCACGAAGCCGAGCCGCAGGTGCATGAGCGGCCCATAGGCCCGAGCCAAGTCCGCCAGGGCGTGGTGCGGGACGGCCCCCATGTGCGGTATGTTGCCGACTATGGGCCACGGCGTGGGGCCCGGCGGGAGGGGCAGCGAGGGGCGCGTGAAGAGCCCGAGGAGGCGGTAGAGAAGCGCGGCCACGACGAGTGTGGCCGAGCCGAGAAGCCAGACGGAAGCCATTTTTTTGTTGAACCTTGCGATATATGTGGTGATGTTGGTTTCGATGAAGTAATTTCTACTTGCTCTAAATGCAAAGTAACTCGTGAACATCTttattgtatgcaaacttatCCAAAAAAAGTTCCTGGCGATTGGGTTTGTGAATATTGCCATTCTGGGAATGGCACAACCTCACCAAATTATGTTGCAAACAAGAACTTCTCTAAAGACTTTGGAATAGATGATTCTGACGTGATTGACAATGAGTTCACACAACCAAAGAGTCCATATAAATTGCATAATTTTGGCAGGTTGGCTTGTTCTAGAAGCCAAAAAGTTGTTGGAACTGGGAAAGTGAAGTTCATTCCAGAAGAAGAAGCCATTAGCCTATTATCCATGGGACATGGGAAACTTCATAGACGATGTGGAGTACGAAAGAGTTTGTTGACTAATCAACAAGCTACTCATTCATTGTCAAAAGATCCATCAAAGGAATATGTCCGCAGAGAGCACTCCTCAAATTCCATTATGCCAGCCAACAAAGAAGAAATTTCTAGCGCAAATGCACGCAAGGCAAATGATAAAGCATTTTGCTTAACAGCAGAAAACTCCCTTCCTTTTAGCACTGCTGATTTGCAGGTAGAAAAACATAGCAAAAAGGCACCTTCTGCAGCTTTACAAGCAAGGCAATCTTCACCTATCGTTGATTCAGGTGGTACATGTTCTACTAGTGGCAAATGTAACAGATCTAATATTGATAAAAGAGATCTGTGCAGTATTCAGATGAACTTCAATCTGTATCGCAATGTTTTACCCTCTTCGCATGCTACTTGGAGGGGTGGATTCAAATTTCTTCAAAATGCTGCTGCTTCTGATTTTTATGATGGATTGGAGGGCCAACCTCCATGCAATGTTCATCGCAAAGCATATAATTTTTCATGCAAAATGCCCCCAGTTCTTGAAGTGAACCCACTTCCTACCTCCGGTCTCTTGAAAGATTTATTCGAAAATGATTGTCCTGATCTTCGAGATGTCGCATTGTATTTCTTTCCTTCAGATAAGTCTGAAAGGTCGAGGCAGAACTTCATTCAAGTATTTGACTTCTTGGATTCCAAAAACATGATGTTGAGAAGTTTTATTGATGGAGTGGAGTTGTTGGTGGTTACTTCAAAACAGCTTAACGTGGACTCCCAGGGTACTATTGGAAGAATTAAGGCAAAATCTTTCCTTTGGGGTGTCTTTCGCCCTGTGAAAAATGATGCAGCCATTGAAACGTTACCTGATACAGAGGATGTTGATATGGAGATTGACATGGTTGGAGGAAAGGATGTGTTGGGGAAAATTGATATTGTTCAGAATTGGAAAGACAAACCCATGAATTTATCTATAAGCTCTGGGGAAGGAACTCTACTTCAGAACCCCTCTGAGAATGTGCACAAGAGCTTAATCACTTCAAGCGACTTGAATTCAAATGTTCAAGATAAATTTTCTTTGTCTACCCAAGTTATAAAGGAAATCAAAACAGAGTTTCCTTCTGATTCTGACCCATCCCTATTGAACTATGTCAAAGATTATCATAAAgttaagaaagaaaatgatgttCCACCAGGTTTTGAAGAGGCCCATAATCATCATCATGTGGGAGTTTCAGGATTTGGCAAGTTGCAACCTCCCAAATTAAAGAGAGTTTGTGACCTGTCTCATTCTCCAAAGGCAACTTCTTCATTCGATATGCCTGCAACTCTGCAAGAGATGACTGCACAAAGGAAGGTGTCTTCTGCTATGATAATAGGTTTATAG 2217 0.4362 LFRIVQGLAGEEMDGADFPEHPPPWTVRREHEVLIVISHMLGSGVRRSAQEIKVMNLQELLGHGSRGRHHHVHEAEPQVHERPIGPSQVRQGVVRDGPHVRYVADYGPRRGARREGQRGAREEPEEAVEKRGHDECGRAEKPDGSHFFVEPCDICGDVGFDEVISTCSKCKVTREHLYCMQTYPKKVPGDWVCEYCHSGNGTTSPNYVANKNFSKDFGIDDSDVIDNEFTQPKSPYKLHNFGRLACSRSQKVVGTGKVKFIPEEEAISLLSMGHGKLHRRCGVRKSLLTNQQATHSLSKDPSKEYVRREHSSNSIMPANKEEISSANARKANDKAFCLTAENSLPFSTADLQVEKHSKKAPSAALQARQSSPIVDSGGTCSTSGKCNRSNIDKRDLCSIQMNFNLYRNVLPSSHATWRGGFKFLQNAAASDFYDGLEGQPPCNVHRKAYNFSCKMPPVLEVNPLPTSGLLKDLFENDCPDLRDVALYFFPSDKSERSRQNFIQVFDFLDSKNMMLRSFIDGVELLVVTSKQLNVDSQGTIGRIKAKSFLWGVFRPVKNDAAIETLPDTEDVDMEIDMVGGKDVLGKIDIVQNWKDKPMNLSISSGEGTLLQNPSENVHKSLITSSDLNSNVQDKFSLSTQVIKEIKTEFPSDSDPSLLNYVKDYHKVKKENDVPPGFEEAHNHHHVGVSGFGKLQPPKLKRVCDLSHSPKATSSFDMPATLQEMTAQRKVSSAMIIGL 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1616 738 PANTHER - 149 677 - -
Sto3g1616 738 MobiDBLite consensus disorder prediction 360 384 - -
Sto3g1616 738 MobiDBLite consensus disorder prediction 108 139 - -
Sto3g1616 738 MobiDBLite consensus disorder prediction 363 384 - -
Sto3g1616 738 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 139 219 IPR013083 -
Sto3g1616 738 MobiDBLite consensus disorder prediction 288 315 - -
Sto3g1616 738 SUPERFAMILY FYVE/PHD zinc finger 149 200 IPR011011 -
Sto3g1616 738 PANTHER ZINC ION-BINDING PROTEIN 149 677 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1616 Sto-Chr3 12085534 12099784 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1616 - - cam:101495222 360.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1616 3 12085534 12099784 Sto3g1616 3 12085534 12099784 ECH